Pan troglodytes (chimpanzee): 459704
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Entry
459704 CDS
T01005
Symbol
SCN9A
Name
(RefSeq) sodium channel protein type 9 subunit alpha isoform X1
KO
K04841
voltage-gated sodium channel type IX alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04742
Taste transduction
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09150 Organismal Systems
09157 Sensory system
04742 Taste transduction
459704 (SCN9A)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptr04040
]
459704 (SCN9A)
Ion channels [BR:
ptr04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
459704 (SCN9A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_cytopl
Na_trans_assoc
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
459704
NCBI-ProteinID:
XP_016804947
Ensembl:
ENSPTRG00000012597
VGNC:
14356
UniProt:
H2QIX3
LinkDB
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Position
2B:complement(52747804..52927374)
Genome browser
AA seq
1988 aa
AA seq
DB search
MAMLPPPGPQSFVHFTKQSLALIEQRIAERKSKEPKEEKKDDDEEAPKPSSDLEAGKQLP
FIYGDIPPGMVSEPLEDLDPYYADKKTFIVLNKGKTIFRFNATPALYMLSPFSPLRRISI
KILVHSLFSMLIMCTILTNCIFMTMNNPPDWTKNVEYTFTGIYTFESLVKILARGFCVGE
FTFLRDPWNWLDFVVIVFAYLTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQ
SVKKLSDVMILTVFCLSVFALIGLQLFMGNLKHKCFRNSLENNETLESIMNTLESEEDFR
KYFYYLEGSKDALLCGFSTDSGQCPEGYTCVKIGRNPDYGYTSFDTFSWAFLALFRLMTQ
DYWENLYQQTLRAAGKTYMIFFVVVIFLGSFYLINLILAVVAMAYEEQNQANIEEAKQKE
LEFQQMLDRLKKEQEEAEAIAAAAAEYTSIRRSRIMGLSESSSETSKLSSKSAKERRNRR
KKKNQKKLSSGEEKGDAEKLSKSESEDSIRRKSFHLGVEGHRRAHEKRLSTPNQSPLSIR
GSLFSARRSSRTSLFSFKGRGRDIGSETEFADDEHSIFGDNDSRRGSLFVPHRPQERRSS
NISQASRSPPMLPVNGKMHSAVDCNGVVSLVDGRSALMLPNGQLLPEVIIDKATSDDSGT
TNQIHKKRRCSSYLLSEDMLNDPNLRQRAMSRASILTNTVEELEESRQKCPPWWYRFAHK
FLIWNCSPYWIKFKKCIYFIVMDPFVDLAITICIVLNTLFMAMEHHPMTEEFKNVLAIGN
LVFTGIFAAEMVLKLIAMDPYEYFQVGWNIFDSLIVTLSLVELFLADVEGLSVLRSFRLL
RVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKIN
DDCTLPRWHMNDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVYMMVMVIGNLVVL
NLFLALLLSSFSSDNLTAIEEDPDANNLQIAVTRIKKGINYVKQILREFILKAFSKKPKI
SREIRQAEDLNTKKENYISNHTLAEMSKGHNFLKEKDKISGFGSSMDKHLMEDSDGQSFI
HNPSLTVTVPIAPGESDLENMNAEELSSDSDSEYSKVRLNQSSSSECSTVDNPLPGEGEE
AEAEPMNSDEPEACFTDGCVRRFSCCQVNIESGKGKIWWNIRKTCYKIVEHSWFESFIVL
MILLSSGALAFEDIYIERKKTIKIILEYADKIFTYIFILEMLLKWIAYGYKTYFTNAWCW
LDFLIVDVSLVTLVANTLGYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALIGAIPS
IMNVLLVCLIFWLIFSIMGVNLFAGKFYECINTTDGSRFPASQVPNRSECFALMNVSQNV
RWKNLKVNFDNVGLGYLSLLQVATFKGWTIIMYAAVDSVNVDKQPKYEYSLYMYIYFVVF
IIFGSFFTLNLFIGVIIDNFNQQKKKLGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRP
GNKIQGCIFDLVTNQAFDISIMVLICLNMVTMMVEKEGQSQHMTEVLYWINVVFIILFTG
ECVLKLISLRHYYFTVGWNIFDFVVVIISIVGMFLADLIETYFVSPTLFRVIRLARIGRI
LRLVKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKEDGINDMFN
FETFGNSMICLFQITTSAGWDGLLAPILNSKPPDCDPKKVHPGSSVEGDCGNPSVGIFYF
VSYIIISFLVVVNMYIAVILENFSVATEESTEPLSEDDFEMFYEVWEKFDPDATQFIEFS
KLSDFAAALDPPLLIAKPNKVQLIAMDLPMVSGDRIHCLDILFAFTKRVLGESGEMDSLR
SQMEERFMSANPSKVSYEPITTTLKRKQEDVSATVIQRAYRRYRLRQNVKNISSIYIKDG
DRDDDLLNKKDMAFDNVNENSSPEKTDATSSTTSPPSYDSVTKPDKEKYEQDRTEKEDKG
KDSKESKK
NT seq
5967 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgttgcctcccccaggacctcagagctttgtccatttcacaaaacagtctctt
gccctcattgaacaacgcattgctgaaagaaaatcaaaggaacccaaagaagaaaagaaa
gatgatgatgaagaagccccaaagccaagcagtgacttggaagctggcaaacagctgccc
ttcatctatggggacattcctcccggcatggtgtcagagcccctggaggacttggacccc
tactatgcagacaaaaagactttcatagtattgaacaaagggaaaacaatcttccgtttc
aatgccacacctgctttatatatgctttctcctttcagtcctctaagaagaatatctatt
aagattttagtacactccttattcagcatgctcatcatgtgcactattctgacaaactgc
atatttatgaccatgaataacccgccggactggaccaaaaatgtcgagtacacttttact
ggaatatatacttttgaatcacttgtaaaaatccttgcaagaggcttctgtgtaggagaa
ttcacttttcttcgtgacccgtggaactggctggattttgtcgtcattgtttttgcgtat
ttaacagaatttgtaaacctaggcaatgtttcagctcttcgaactttcagagtattgaga
gctttgaaaactatttctgtaatcccaggcctgaagacaattgtaggggctttgatccag
tcagtgaagaagctttctgatgtcatgatcctgactgtgttctgtctgagtgtgtttgca
ctaattggactacagctgttcatgggaaacctgaagcataaatgttttcgaaattcactt
gaaaataatgaaacattagaaagcataatgaataccctagagagtgaagaagactttaga
aaatacttttattacttggagggatccaaagatgctctcctttgtggtttcagcacagat
tcaggtcagtgtccagaggggtacacctgtgtgaaaattggcagaaaccctgattatggc
tacacgagctttgacactttcagctgggccttcttagccttgtttaggctaatgacccaa
gattactgggaaaacctttaccaacagacgctgcgtgctgctggcaaaacctacatgatc
ttctttgtcgtagtgattttcctgggctccttttatctaataaacttgatcctggctgtg
gttgccatggcatatgaagaacagaaccaggcaaacattgaagaagctaaacagaaagaa
ttagaatttcaacagatgttagaccgacttaaaaaagagcaagaagaagctgaggcaatt
gcagcggcagcggctgaatatacaagtattaggagaagcagaattatgggcctctcagag
agttcttctgaaacatccaaactgagctctaaaagtgctaaagaaagaagaaacagaaga
aagaaaaagaatcagaagaagctctccagtggagaggaaaagggagatgctgagaaattg
tcgaaatcagaatcagaggacagcatcagaagaaaaagtttccaccttggtgtcgaaggg
catagacgagcacatgaaaagaggttgtctacccccaatcagtcaccactcagcattcgt
ggctccttgttttctgcaaggcgaagcagcagaacaagtctttttagtttcaaaggcaga
ggaagagatataggatctgagactgaatttgccgatgatgagcacagcatttttggagac
aatgatagcagaaggggctcactgtttgtgccccacagaccccaggagcgacgcagcagt
aacatcagccaagccagtaggtccccaccaatgctgccggtgaacgggaaaatgcacagt
gctgtggactgcaacggtgtggtctccctggttgatggacgctcagccctcatgctcccc
aatggacagcttctgccagaggtgataatagataaggcaacttctgatgacagcggcacg
accaatcaaatacacaagaaaaggcgttgtagttcctatctcctttcagaggatatgctg
aatgatcccaacctcagacagagagcaatgagtagagcaagcatattaacaaacactgtg
gaagaacttgaagagtccagacaaaaatgtccaccttggtggtacagatttgcacacaaa
ttcttgatctggaattgctctccatattggataaaattcaaaaagtgtatctattttatt
gtaatggatccttttgtagatcttgcaattaccatttgcatagttttaaacacattattt
atggctatggaacaccacccaatgactgaggaattcaaaaatgtacttgctataggaaat
ttggtctttactggaatctttgcagctgaaatggtattaaaactgattgccatggatcca
tatgagtatttccaagtaggctggaatatttttgacagccttattgtgactttaagttta
gtggagctctttctagcagatgtggaaggattgtcagttctgcgatcattcagactgctc
cgagtcttcaagttggcaaaatcctggccaacattgaacatgctgattaagatcattggt
aactcagtaggggctctaggtaacctcaccttagtgttggccatcatcgtcttcattttt
gctgtggtcggcatgcagctctttggtaagagctacaaagaatgtgtctgcaagatcaat
gatgactgtacgctcccacggtggcacatgaacgacttcttccactccttcctgattgtg
ttccgcgtgctgtgtggagagtggatagagaccatgtgggactgtatggaggtcgctggt
caagctatgtgccttattgtttacatgatggtcatggtcattggaaacctggtggtccta
aacctatttctggccttattattgagctcatttagttcagacaatcttacagcaattgaa
gaagaccctgatgcaaacaacctccagattgcagtgactagaattaaaaagggaataaat
tatgtgaaacaaatcttacgtgaatttattctaaaagcattttccaaaaagccaaagatt
tccagggagataagacaagcagaagatctgaatactaagaaggaaaactatatttctaac
catacacttgctgaaatgagcaaaggtcacaatttcctcaaggaaaaagataaaatcagt
ggttttggaagcagcatggacaaacacttgatggaagacagtgatggtcaatcatttatt
cacaatcccagcctcacagtgacagtgccaattgcacctggggaatccgatttggaaaat
atgaatgctgaggaacttagcagtgattcggatagtgaatacagcaaagtgagattaaac
cagtcaagctcctcagagtgcagcacagttgataaccctttgcctggagaaggagaagaa
gcagaggctgaacctatgaattccgatgagccagaggcctgtttcacagatggttgtgta
cggaggttctcatgctgccaagttaacatagagtcagggaaaggaaaaatctggtggaac
atcaggaaaacctgctacaagattgttgaacacagttggtttgaaagcttcattgtcctc
atgatcctgctcagcagtggtgccctggcttttgaagatatttatattgaaaggaaaaag
accattaagattatcctggagtatgcagacaagatcttcacttacatcttcattctggaa
atgcttctaaaatggatagcatatggttataaaacatatttcaccaatgcctggtgttgg
ctggatttcctaattgttgatgtttctttggttactttagtggcaaacactcttggctac
tcagatcttggccccattaaatcccttcggacactgagagctttaagacctctaagagcc
ttatctagatttgaaggaatgagggtcgttgtgaatgcactcataggagcaattccttcc
atcatgaatgtgctacttgtgtgtcttatattctggctgatattcagcatcatgggagta
aatttgtttgctggcaagttctatgagtgtattaacaccacagatgggtcacggtttcct
gcaagtcaagttccaaatcgttccgaatgttttgcccttatgaatgttagtcaaaatgtg
cgatggaaaaacctgaaagtgaactttgataatgtcggacttggttacctatctctgctt
caagttgcaacttttaagggatggacgattattatgtatgcagcagtggattctgttaat
gtagacaagcagcccaaatatgaatatagcctctacatgtatatttattttgtcgtcttt
atcatctttgggtcattcttcactttgaacttgttcattggtgtcatcatagataatttc
aaccaacagaaaaagaagcttggaggtcaagacatctttatgacagaagaacagaagaaa
tactataatgcaatgaaaaagctggggtccaagaagccacaaaagccaattcctcgacca
gggaacaaaatccaaggatgtatatttgacctagtgacaaatcaagcctttgatattagt
atcatggttcttatctgtctcaacatggtaaccatgatggtagaaaaggagggtcaaagt
caacatatgactgaagttttatattggataaatgtggtttttataatccttttcactgga
gaatgtgtgctaaaactgatctccctcagacactactacttcactgtaggatggaatatt
tttgattttgtggtcgtgattatctccattgtaggtatgtttctagctgatttgattgaa
acgtattttgtgtcccctaccctgttccgagtgatccgtcttgccaggattggccgaatc
ctacgtctagtcaaaggagcaaaggggatccgcacgctgctctttgctttgatgatgtcc
cttcctgcgttgtttaacatcggcctcctgctcttcctggtcatgttcatctacgccatc
tttggaatgtccaactttgcctatgttaaaaaggaagatggaattaatgacatgttcaat
tttgagacctttggcaacagtatgatttgcctgttccaaattacaacctctgctggctgg
gatggattgctagcacctattcttaacagtaagccacccgactgtgacccaaaaaaagtt
catcctggaagttcagttgaaggagactgtggtaacccatctgttggaatattctacttt
gttagttatatcatcatatccttcctggttgtggtgaacatgtacattgcagtcatactg
gagaattttagtgttgccactgaagaaagtactgaacctctgagtgaggatgactttgag
atgttctatgaggtttgggagaagtttgatcccgatgcgacccagtttatagagttctct
aaactctctgattttgcagctgccctggatcctcctcttctcatagcaaaacccaacaaa
gtccagctcattgccatggatctgcccatggttagtggtgaccggatccattgtcttgac
atcttatttgcttttacaaagcgtgttttgggtgagagtggggagatggattctcttcgt
tcacagatggaagaaaggttcatgtctgcaaatccttccaaagtgtcctatgaacccatc
acaaccacactaaaacggaaacaagaggatgtgtctgctactgtcattcagcgtgcttat
agacgttaccgcttaaggcaaaatgtcaaaaatatatcaagtatatacataaaagatgga
gacagagatgatgatttactcaataaaaaagatatggcttttgataatgttaatgagaac
tcaagtccagaaaaaacagatgccacttcatccaccacctctccaccttcatatgatagt
gtaacaaagccagacaaagagaaatatgaacaagacagaacagaaaaggaagacaaaggg
aaagacagcaaggaaagcaaaaaatag
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