Pan troglodytes (chimpanzee): 462338
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Entry
462338 CDS
T01005
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6 isoform X1
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
462338 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptr03019
]
462338 (CNOT6)
Enzymes [BR:
ptr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
462338 (CNOT6)
Messenger RNA biogenesis [BR:
ptr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
462338 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
462338 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_4
LRR_8
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
462338
NCBI-ProteinID:
XP_001155177
Ensembl:
ENSPTRG00000017636
VGNC:
6841
UniProt:
A0A2I3RXM9
A0A6D2W503
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Position
5:158471276..158555134
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AA seq
557 aa
AA seq
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MPKEKYEPPDPRRMYTIMSSEEAANGKKSHWAELEISGKVRSLSASLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLSGTAKRITTEQPPPRSWIMLQEP
DRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQE
VETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTV
EFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANA
HMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFGTIPLVLCADLNSLPDSG
VVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGRITHGFKLQSAYESGLMPYT
NYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLEL
LLPFLPQVNGIHLPGRR
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaagtacgagccccctgaccctcggaggatgtatacaattatgtcttct
gaggaagcagcaaatggaaagaaatcccactgggcagagcttgaaataagtggaaaagtc
agaagcttaagcgcatctttgtggtcactaactcacctgacagctttgcatttgagtgac
aattccctgtcccgaattccttcagacattgccaagcttcacaatctggtgtatttggac
ctgtcatctaataaaattcgtagcttacccgcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaatccccttacccaggatatattgaacctttat
caggaaccagatggaacaagacggctgctgaactatttgcttgataatttgtcaggtact
gcaaaaagaattacaacagaacaaccacctccaaggtcttggattatgttacaagaacca
gataggacaaggccaactgccttgttttctgtcatgtgctataatgttctttgtgataaa
tatgcgacccggcagttatacggctactgtccatcgtgggcgctaaactgggactacagg
aaaaaggccattattcaagaaatcttgagctgcaatgctgatatcgtaagtcttcaggag
gttgaaacggaacagtattacagtttttttctggtagagctgaaagaacgtggctataat
ggattcttcagtcctaagtctagagctaggacaatgtcagaacaagaaaggaaacatgtt
gatggctgtgcaatattcttcaagacagaaaaatttactttggttcagaaacacactgtt
gaatttaatcagctagccatggcaaattctgaggggtctgaagctatgctgaacagagtc
atgacaaaagataacattggggttgcagtactgctagaacttcggaaggaatcgattgaa
atgccgtctggaaagccacatcttggaacagaaaaacaacttattcttgtggctaatgcc
cacatgcattgggaccctgaatactctgatgtgaagttggtacaaactatgatgttcctc
tcagaagtgaagaacattattgataaagcctctcgcaacctcaaatccagtgttttggga
gaatttggaactattccacttgtgttatgtgcagatcttaattctttgccagactctggt
gttgtagaatatttgagcacaggtggagtagaaacaaatcacaaagactttaaggagttg
aggtataatgaaagtctcacaaacttcagctgtcatgggaagaatggaaccaccaatgga
aggatcactcatggtttcaagttacagagtgcctatgagagtggcctgatgccttacacg
aattacacatttgatttcaagggtataatcgactacattttctattctaaacctcagctg
aacaccttaggcatcctgggccctctggaccaccactggctggttgagaataacatcagt
ggctgcccgcaccccctcatcccctctgaccacttctcactttttgcacaactggagctc
ttactgcctttcctgccccaagtcaacggcatccaccttcctggcaggaggtag
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