Pan troglodytes (chimpanzee): 470923
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Entry
470923 CDS
T01005
Symbol
COL6A5
Name
(RefSeq) collagen alpha-5(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
ptr
Pan troglodytes (chimpanzee)
Pathway
ptr04151
PI3K-Akt signaling pathway
ptr04510
Focal adhesion
ptr04512
ECM-receptor interaction
ptr04820
Cytoskeleton in muscle cells
ptr04974
Protein digestion and absorption
ptr05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
ptr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
470923 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
470923 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
470923 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
470923 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
470923 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
470923 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptr04147
]
470923 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
ptr00536
]
470923 (COL6A5)
Exosome [BR:
ptr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
470923 (COL6A5)
Glycosaminoglycan binding proteins [BR:
ptr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
470923 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
470923 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
Copine
vWA-TerF-like
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
470923
NCBI-ProteinID:
XP_009444731
Ensembl:
ENSPTRG00000015386
VGNC:
11969
LinkDB
All DBs
Position
3:128466369..128604439
Genome browser
AA seq
2614 aa
AA seq
DB search
MKILLIIFVLIIWTETLADQSPGPGPVYADVVFLVDSSDHLGPKSFPFVKTFISKMINSL
PIEANKYRVALAQYSDEFHSEFHLSTFEGRSPMLNHLKKNFQFIGGSLQIGKALQEAHRT
YFSAPTNGRDRKQFPPILVVLASAESEDEVEGASKALQKDGVKIISVGVQEASEENLKAM
ATSHFHFNLRTIRDLSTFSQNMTQIIKDVTKYKEGAVDADMQVHFPISCQKDSLADLVFL
VDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYSNSAKTISFLKSSTTQSEFQQ
QIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVTHRPSDDEVHDAALN
LRLEDVNVFALSIQGANNTQLEEIVSYPPEQTISTLKSYADLETYSKKFLKKLQNEIWSQ
ISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVR
VGVVQYSDDTEVEFYVTDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKNGMKDRM
SKVPCYLIVLTDGMSTDRVVEPAKRLRAEQITVHAVGIGAANKTELQEIAGKEERVSFGQ
NFDALKSIKNEVIREICAEKGCEDMKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQI
GADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFVGQYFTH
SKGARLGAKKFLILITDGVAQDDVRDPARILRGKDVTIFSVGVYNANRSQLEEISGDSSL
VFHVENFDHLKALERKLIFHVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHL
VKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHA
NALFTEEHGSRIKQNVKQMLIVITDGESHDHDQLNDTALELRNKGITIFAVGVGKANQKE
LEGMAGNKNNTIYVDNFDKLKDVFTLVQERMCTEAPEVCHLQEADVIFLCDGSDRVSNSD
FVTMTTFLSDLIDNFDIQSQRMKIGMAQFGSNYQSIIELKNSLTKTQWKTQIQNVSKSGG
FPRIDFALKKVSNMFNLHAGGRRNAGVPQTLVVITSGDPRYDVADAVKTLKDLGICVLVL
GIGNVYKEQLLPITGNSEKIITFQDFDKLKNVDVKKRIIREICQSCGKTNCFMDVMVGFD
ISTHVQGQPLFQGHPQLESYLPGILEDISSIKGVSCGAGTEAQVSLAFKVNSDQGFPAKF
QIYQKAVFDSLLQVNVSGPTHLNAQFLRSLWDTFKDKSASRGQVLLIFSDGLQSESNIML
ENQSDRLREAGLDALLVVSLNTTAHHEFSSFEFGKRFDYRTHLTIGMRELGKKLSQYLGN
IAERTCCCTFCKCPGIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNPGVRGDTGPQGDKG
IAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEGSHGFPGIKGEKGDPGSQGSPGSRG
APGQYGEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGRTGQKGAQGSPSSRGSRGREGQR
GLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGHKGPQGSPGLMGAKGST
GRPGLLGKKGEPGIPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDVGQKG
DIGDPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQPVYSQCDLIRF
LREHSPCWKEKCPAYPTELVFALDNSYDVTEDSFNKTRDIITSIVNDLNIRENNCPVGAR
VAMVSYNSGTSYLIRWSDYNRKKQLLQQLSQIKYQDTTEPRDVGNAMRFVTRNVFKRTYA
GANVRRVAVFFSNGQTASRSSIITATMEFSALDISPTIFAFDERVFLEAFGFDNTGTFQV
IPVPPNGENQTLERLWRCTLCYDKCFANACIREAFLPEDSYMDVAFLIDNSWNIAKDDFK
AVKALVSSVIDNFNIASDPLISDSGDRIALLSYSPWESSRRKMGTVKTEFDFITYNNQLL
MKNHIQTSFQQLNGEATIGRALLWTTENLFPETPYLRKHKVIFVVSAGENYERKEFVKMM
ALRAKCQGYVIFVISLGSTRKDDMEELASYPPDQHLIQLGRIHKPDLNYIAKFLKPFLYS
VRRGFNQYPPPMLEDACRLINLEGENNQNDGFQFVTELQEDFLGENGFIGQELNSGRESP
FVKMEDNGSDYLVYLPSQMFEPQKLMINYEKDQKSAEIASLTSGHENYGRKEEPDHTYEP
GDVSLQEYYMDVAFLIDASQRVGSDEFKEVKAFITSVLDYFHIAPAPLTSTLGDRVAVLS
YSPPGYMPNTEECPVYLEFDLVTYNSIHQMKHHLQDSQQLNGDVFIGHALQWTIDNVFVG
TPNLRKNKVIFVISAGETNSLDKDVLRNVSLRAKCQGYSIFVFSFGPKHNDKELEELASH
PLDHHLVQLGRTHKPDWNYIIKFVKPFVHLIRRAINKYPTEDMKATCVNMTSPNPENGGT
ENTVLLLPGIYEIKTENGDLFDEFDSQAQHLLVLGNNHSNGSETATDLMQKLYLLFSTEK
LAMKDKEKAHLEEISALVVDKQQEKEDGEDTKSS
NT seq
7845 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcctgctaattatatttgtcctaatcatttggactgaaacattggcagaccag
agcccagggccaggccctgtgtatgcagatgttgtgtttctggtggacagctccgatcac
ctgggacctaagtcattcccattcgtgaaaacgttcatcagcaaaatgatcaacagtctc
cccatagaggccaacaaataccgtgtagccctggcccagtacagcgacgagtttcacagt
gaattccatctgagcaccttcgaaggcagaagccccatgctgaaccacctcaagaagaac
tttcagttcattggcgggtccctgcagataggaaaggctcttcaggaggctcataggacc
tacttctctgcacccacaaatgggagagacaggaaacagtttcccccaattttggtggtc
ctggcttcggctgagtctgaggatgaagtggaaggggcttcgaaagccctgcagaaagac
ggggtgaaaattatctccgtgggggtgcaggaagcttctgaggaaaatctgaaggccatg
gccacgtcccatttccatttcaaccttcggacaatcagagacctcagcacattttcccaa
aacatgacacagatcatcaaggatgtaaccaagtataaggagggagccgtcgatgctgat
atgcaagttcacttccccatatcctgtcagaaagattcacttgctgacctcgtgttcctg
gtggatgagtcacttgggaccggaggaaatttaaggcatcttcagaccttccttgagaac
attaccagctccatggatgtgaaggaaaattgcatgcgacttggactgatgagttacagc
aatagtgccaagactatttcatttcttaaatcaagcacaacccaatctgaatttcagcag
caaatcaagaatctttctatccaagttgggaaatccaatacaggggctgccattgatcag
atgagaagagacggcttctcagagtcatatggcagcagaagagcacaaggagtgcctcag
attgcagttctggtcacccacagaccatcagatgatgaggtgcatgatgctgcactgaac
cttcgactggaggatgtaaacgtgtttgccttgagcatccaaggggctaacaatacccag
ttagaagaaatagtgtcttatcctccagaacagacaatttccacgctgaagtcctatgca
gacttagaaacttacagtaaaaagttcctgaaaaagctccagaatgaaatatggtcccaa
atttctacttatgctgaacaaaggaatcttgataaaactggctgtgtggatacaaaagag
gctgatatccatttcctcattgatggctcaagcagcatccaggagaaacagtttgagcag
atcaagagatttatgttggaagtgacagaaatgtttagcattggcccagacaaagtccga
gttggagttgtgcagtattcagatgacacagaagtggaattttatgtcactgactattct
aatgacattgacttaagaaaggctatttttaacattaagcaactaactggtggaacttat
actgggaaagctctggattacatactgcaaataataaaaaatggaatgaaggatagaatg
agcaaggttccctgttacctcattgtgttgactgatgggatgtccacagacagagtcgtg
gaacctgctaagagactaagggctgagcaaatcactgttcatgcagttggcattggggca
gctaataaaacagaactgcaagaaattgctgggaaagaagaaagggttagctttgggcag
aactttgatgctttgaaaagcataaaaaatgaagtcattcgtgaaatctgcgctgaaaaa
ggatgtgaagacatgaaggctgacatcatgtttctggtggacagttcttggagtatagga
aatgaaaattttaggaaaatgaaaatcttcatgaaaaacctgttaactaaaattcaaatt
ggtgcagacaaaacccagattggtgttgttcagttcagtgataaaactaaggaagagttc
cagcttaatagatactttacacagcaagaaatttctgatgcaatagatagaatgtctctc
atcaatgaaggcactttaactggaaaggcactaaattttgtaggtcaatacttcacccac
tccaagggggcccgtttgggggccaaaaaatttctcatcctcatcacagatggagtagcg
caggatgatgtgagagatcctgctagaattcttcggggcaaagatgtgaccatcttctct
gtaggagtatacaatgccaatagatctcagctagaagagatcagtggggatagcagccta
gtttttcatgttgagaacttcgatcatctaaaggcactagaaaggaaacttatctttcat
gtgtgtgctctccatgattgtaaaaggattacactactagatgtcgtgtttgtgctggat
cattcaggtagcataaaaaaacaatatcaagatcacatgattaacctaactatccatttg
gtgaagaaagcagatgttggcagggaccgagttcagtttggagccctcaaatactctgac
caacctaacatccttttctaccttaatacatactcgaacagatcagcaataattgagaat
ctgcggaagcgcagggacactggagggaacacctacactgccaaggctctcaagcatgca
aatgccctgtttacagaggaacatggcagccgcatcaagcaaaatgtgaagcagatgctg
attgtcatcaccgatggggaatcccatgaccatgatcagctcaatgacacagcattggaa
ctgagaaacaaaggcatcaccatctttgcagtgggtgtaggaaaggccaaccaaaaggaa
cttgagggtatggcagggaataaaaacaatactatctatgtagataattttgacaaactg
aaagatgttttcacacttgttcaagaacgtatgtgtactgaagcaccagaggtctgtcat
cttcaggaagctgacgtgattttcctttgcgatggctctgacagggtatctaattcagat
tttgtaaccatgacaactttcttgtcagacttaattgataattttgacattcagtctcaa
agaatgaaaattggtatggctcaatttggaagcaactaccagagtattattgagttgaaa
aactctctgactaaaacccagtggaagactcaaattcagaatgtctccaagagcggtgga
tttccgagaattgactttgcccttaaaaaagtgagcaatatgtttaatctacatgctggt
gggagaagaaatgctggtgtcccccaaactttggttgttatcacatctggagatcctcgc
tatgatgtggcagatgcagtaaaaaccctgaaggaccttggaatttgtgtcctggttttg
ggcataggaaatgtttataaggaacagctcctgccaataacaggcaattctgaaaaaata
atcacttttcaagactttgataaattaaagaatgtggatgtgaaaaaaagaatcatccgt
gaaatctgccagagctgtgggaaaaccaattgctttatggacgtaatggttgggtttgac
atctccactcatgtgcaggggcagcctttgttccagggccacccccagctggaatcctac
ctcccaggcatcttagaagacatcagctctatcaagggggtgagctgtggggctggcaca
gaggcacaggtgagcttggcgtttaaggtgaacagtgaccaaggattccctgccaagttc
caaatctatcagaaagcagtgtttgacagcttgctgcaagtcaacgtcagtgggccaact
catctgaacgcacagttcttgcggtctctttgggacacatttaaggataaatctgcatcc
cggggccaggtgctgcttattttttcagacggtctccagagtgaaagcaacataatgctt
gaaaatcaatcagacaggctcagagaagcaggacttgatgctctgctggtagtgtccctt
aacacaactgctcatcatgagttttctagctttgaatttggaaaaagattcgattacagg
actcatctgactattggaatgagagaactgggcaaaaaactatcacagtacctgggaaac
attgcagagaggacttgctgctgtacattctgcaaatgtccaggaattccaggacctcat
gggacccgaggactacaagccatgaagggttctcaaggtctgaaaggcagcagaggacac
aggggagaggatggaaaccctggagtacgaggagacacaggaccccaaggagataaaggg
attgcaggatgtccaggggcgtggggtcagaagggactcaaaggattttctggacctaag
ggaggtcatggagacgatgggattgatggacttgatggggaagagggctctcatggattt
cctggaataaaaggagaaaaaggcgatccaggatctcagggcagcccaggttccagaggt
gcccctgggcagtatggagagaagggcttcccaggggatccgggtaatccaggacaaaac
aataacatcaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaactgga
cagaaaggggcgcaaggcagtcctagttccagaggcagcaggggaagagaaggtcaaagg
ggactccgaggtgtctcaggagaaccaggaaatcctggacctacaggcacattgggagct
gaaggattacaaggcccacaggggtcacagggaaatcctggcagaaaaggagaaaaagga
agccaggggcacaaaggacctcagggttctcctgggctaatgggagctaaagggagcact
ggaagacctggacttttggggaaaaaaggagagcctggaattcctggagatctagggcca
gtggggcagactgggcagcgaggaagacagggagattctggcatcccaggctacggtcag
atgggacgaaaaggagtaaagggcccaagaggattccctggagatgtggggcagaagggt
gatattggtgatcctggaattcctgggggacctggacccaaaggatttaggggactagca
ctcactgtaggcttgaaaggtgaagagggatctcgaggactcccaggccctcctggacag
agaggcattaaaggcatggcagggcagcctgtatattctcaatgtgatctgatccggttt
ttgcgggaacatagtccttgctggaaagaaaaatgtccagcatatccaacagagctagta
tttgctctggacaattcctacgatgtcacagaagacagctttaataaaacacgggacatc
atcacttccattgtcaatgaccttaacatcagggaaaataactgtcctgtgggagcaaga
gttgccatggtttcctataactcaggcaccagctatctcatccgctggtctgactacaat
aggaagaagcaactcctccagcagctttcccaaataaagtatcaagacaccacagagccc
cgagatgttggtaatgcaatgaggtttgtgacccgcaatgtgttcaagcggacgtatgca
ggagccaacgtgaggagagttgctgtgttttttagcaatggtcaaacggccagtaggtca
tccatcattacggccaccatggagtttagtgccctggatatcagtccaacaatctttgct
tttgatgagagagttttccttgaagcttttgggtttgacaacactggaacatttcaggtg
attccagttcctccaaatggggaaaatcaaacattagaaagactttggcgctgtacactt
tgctatgataaatgttttgcaaatgcttgcattcgagaggctttcttacctgaagattca
tacatggatgtagccttcctcatagacaattcttggaatatagcaaaggatgattttaag
gctgtgaaagccttggtgagctcagtgattgacaacttcaacattgcttcagacccttta
atctcagactctggtgataggattgctttgttgagctattctccttgggaaagttccagg
agaaagatgggtacagtaaaaacagagtttgatttcatcacttataacaaccaactccta
atgaagaatcacatccagacttccttccaacagctaaatggagaagcaacaattggtcgt
gccctactgtggaccactgaaaatctttttccagaaacaccctatctaagaaaacacaag
gtcatctttgtggtctcagctggagaaaattatgagagaaaagaatttgtaaaaatgatg
gctttgagggctaagtgtcaaggctacgtcatatttgtgatttctctgggctctacacgt
aaggatgacatggaggagttagccagctacccacctgatcaacacctgatacagcttggg
agaatacataaaccagatctgaattatattgcaaagttcttaaagccatttttatactcg
gtcaggaggggattcaatcagtacccaccaccgatgcttgaggatgcctgtagactcatc
aatttagaaggagagaataatcaaaatgatggtttccaatttgttactgagctacaagag
gattttttgggagagaatggcttcattggccaagaattaaattctggaagagaatcacct
tttgtaaagatggaagacaatggaagtgactatttggtttaccttccaagccaaatgttt
gagccacaaaaattaatgatcaattatgaaaaagatcaaaaatctgcagaaattgcaagt
ctcacttctggacatgaaaattatggcagaaaagaagaaccagatcatacttatgaacct
ggagatgtctctcttcaagaatattacatggatgtggctttcctcatagatgcttcccaa
agagtaggaagtgatgagtttaaggaagtaaaagcttttataacctcagtgcttgattac
tttcacatcgcccccgctccactgacctccaccttaggagacagggttgctgtcctgagc
tactctcccccaggctatatgcctaacactgaagaatgccctgtctacctggaatttgat
ttggttacttataacagtatacaccaaatgaaacatcatctccaagactctcaacagctc
aatggagatgtttttattggccatgccttgcagtggacaattgacaatgtctttgtagga
acccccaatctgaggaaaaacaaagttatctttgtaatatctgctggcgaaaccaactct
ttagacaaagatgtcttaaggaatgtgtctctgagagccaagtgtcaaggctactccata
tttgtgttttcctttggccctaaacacaatgacaaagaattagaagaattagccagccac
cctctggatcatcacttggtccaacttggccgaacccacaagccagattggaactatatc
atcaagtttgtcaagccatttgtccatttaatcagacgtgccatcaacaaatatcccacc
gaagatatgaaagccacatgtgttaacatgacctctcccaacccagagaacggtggcaca
gaaaacactgtattacttcttcctgggatatatgaaataaagacagaaaatggtgatctg
tttgatgaatttgattcccaggcacaacatctccttgtattagggaacaatcatagtaat
ggttctgagacagctactgatttgatgcagaagttatacctgctcttttcaactgagaaa
ctggcaatgaaagacaaggaaaaagcacatttagaagaaatttcagctctagtggttgat
aaacagcaagaaaaagaagatggtgaagatacaaagtcatcatag
DBGET
integrated database retrieval system
