Photorhabdus thracensis: VY86_04840
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Entry
VY86_04840 CDS
T03944
Name
(GenBank) ATP-dependent helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
ptt
Photorhabdus thracensis
Brite
KEGG Orthology (KO) [BR:
ptt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptt03021
]
VY86_04840
Transcription machinery [BR:
ptt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
VY86_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AKH62764
UniProt:
A0A0F7LI37
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All DBs
Position
1231740..1234646
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVALDARMVTLLFPASGENRLYARNDSPITRVMFNSGDV
VTSHEGWQLKVDEVQQENGLIIYTGTRLDTLQENVSLREVFLDSKLTFNKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFKLAESGLRGIRASLIPHQLHIANEVGKRHAPRVLLADEVG
LGKTIEAGMIIHQQLLAGRAERVLIIVPESLQHQWLVEMLRRFNLRFALFDDSRYTEARH
DSDNPFETEQLILCSLDFVRRNKQRFEHMLEANWDLMVVDEAHHLAWSEDAPSREYQVIE
ELAEQIPGVLLLTATPEQLGQESHFARLRLLDPNRFHDYQAFIDEQQNYRPVADAVTLLL
SGEQLNNNQLNLMSELISEQDIEPLLKAANSNSDESETARRELISMLMDRHGTSRILFRN
TRNGVKGFPHRELHQIKLPLPTQYQTAIKVSDIMGAKKSLESRARDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLGFLTANRDEKVLVICAKATTALHLEQVLREREGIRGAVFHEGLSL
VERDRAAAYFASEEEGAQVLLCSEIGSEGRNFQFANQLVMFDLPFNPDLLEQRIGRLDRI
GQSRDIQISVPYLENTAQAVLIRWYHEGLDAFEHTCPTGRTIYDNYYETLLNYLAKPNEQ
DKFGEFIEQCRQQHEQLKSQLEQGRDRLLEMNSNGGEHGLQLAEKIAKYDDDIELVNFSL
NLFDIVGINQEDRSDNMIVLTPSDHMLVPDFPGLPQDGCTITFDREQALSREDAQFISWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLVELIYVVEAQAPKHLQLTRFLPPTP
LRILMDLKGNNLAGQVEFESFNRQLNAVNRHTASKLVNAVQKEVHAILQQAEGLIETQAQ
SLIEQAKQEADEKLTAELSRLEALKAVNPNIRDDELEAIESNRQQLLLNLNQASWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccatttaccctcggtcaacgctggatcagcgatacagaaagcgaacttggattagga
accgttgttgcattggacgcacgaatggtcactttgctttttcctgccagcggtgaaaac
cgcctttacgcacgcaatgattctcctattacccgcgttatgtttaactcgggggatgtt
gtcaccagccatgaaggctggcaactcaaagtggatgaagtccagcaagagaatggcctg
attatttatacaggtacacgtcttgatactctgcaagaaaatgtcagtctgcgcgaagtg
ttcctcgacagcaaactcaccttcaacaagccacaggatcgcttgtttgccggtcagatt
gaccgcatggatcgttttgccttgcgctttcgcgcccgtaaatatcaaagcgaacaattt
aaactggctgaaagtggtctgcggggtatccgcgcaagcctgatcccccatcagcttcat
atcgctaatgaagtaggcaaacgccacgcgccaagggtattgttggctgatgaagtcggc
ttgggtaaaaccatcgaagctgggatgatcatccaccagcaactgttagcaggccgtgct
gaacgtgttctgattattgtgccggaaagccttcaacatcaatggctggtagagatgctg
cgccgtttcaatctgcgttttgccctgtttgatgacagtcgctataccgaagcccggcat
gacagcgataatccatttgaaacagaacaactgatactttgttcactggattttgtccgc
cgtaataaacaacgttttgagcatatgcttgaagccaattgggatctgatggtggtggat
gaagctcaccacctggcctggagtgaagatgcaccaagtcgagaataccaggttattgaa
gaattggctgaacagatcccgggtgtattgctgctgactgcaacaccggagcagttagga
caggaaagtcattttgcccgcctgcgcctgcttgatccaaaccgttttcatgattatcag
gcttttattgacgaacaacaaaactaccgcccggttgccgatgccgtaactctgctgtta
tctggcgaacaacttaacaataatcaattaaatctgatgagtgagctgattagtgaacag
gatattgagcctctgctgaaagcagccaacagtaatagtgatgaaagtgaaaccgcacgc
cgtgaactgatttccatgctgatggatcgccacggcaccagccgtattctgttccgtaat
acccgtaatggcgtgaaaggctttcctcatcgggaactgcatcagattaagttacctcta
ccaacccaatatcagacagccattaaagtctccgatattatgggcgctaaaaaatcgctg
gaatcacgcgcaagggatatgctttacccagagcagatttatcaggaatttgaaggcgaa
aacgccacatggtggaattttgatccccgcgtagaatggttacttggtttcctgaccgca
aaccgcgatgaaaaagtgctggtaatttgtgctaaagcaaccacagctctgcacctggaa
caggtactgcgtgaacgcgaaggcattcgcggcgccgttttccatgaaggattatcactg
gttgaacgtgaccgcgccgcagcctactttgcttctgaagaagagggggcacaagtgttg
ctgtgctccgaaattggctcagaaggccgtaacttccagtttgccaaccagttagtcatg
ttcgatttgccattcaacccggatttactggagcaacgtatcggacgtctggatcgtatc
ggccaaagccgtgatatccaaatcagtgtgccctatctggaaaataccgcacaggccgtc
ctgatccggtggtatcacgaaggtctggatgcattcgaacacacctgcccaacaggccgt
actatctacgataactattatgaaactctgctgaactatctggccaaaccgaacgaacag
gataaatttggtgagtttattgagcaatgccgccaacaacatgagcagctcaaatcacaa
ctggagcaaggccgcgaccggctgctggaaatgaactccaatggcggagaacatggctta
cagttagcagaaaaaattgcaaagtatgatgatgatattgaactggtgaatttctctctc
aacttgtttgatatcgttggtatcaatcaggaagatcgcagcgataacatgatagtgctg
acaccctccgatcatatgctggttccggatttcccaggactgccacaagatggctgtact
atcacattcgatcgtgaacaagcgctatcccgtgaggatgcccagtttatcagttgggaa
cacccgattatccgtaatgggttggacctgatcctttccggtgataccggcagctgtgcc
gtctctcttttgaaaaataaagcattacccgttggaaccctgctggtagagctgatttat
gtggttgaagcacaagcgccaaaacatctgcaattgacccgtttcctgccgccaacacca
ttgcggatactgatggatttgaaaggcaacaatctggctggtcaggtggaatttgaaagc
tttaaccgccagcttaacgcagtcaatcgtcatactgcgagtaaactggttaatgcggta
caaaaagaagttcacgctattttacaacaggcagaaggtttgatagaaacacaggctcaa
tcattgattgaacaagctaaacaggaagctgatgaaaaactcacggctgaactttcccgt
ctggaagcactgaaggcagtcaatccgaatattcgtgatgatgagttggaagcgattgaa
tccaatcgccaacagttactgcttaacctgaatcaagcaagctggcgtctggatgctatc
cgccttgttgttgttacacatcagtaa
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