KEGG   Pseudoalteromonas tunicata: PTUN_a0674
Entry
PTUN_a0674        CDS       T05187                                 
Symbol
orn
Name
(GenBank) oligoribonuclease
  KO
K13288  oligoribonuclease [EC:3.1.-.-]
Organism
ptu  Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:ptu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptu03019]
    PTUN_a0674 (orn)
   03009 Ribosome biogenesis [BR:ptu03009]
    PTUN_a0674 (orn)
Messenger RNA biogenesis [BR:ptu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     PTUN_a0674 (orn)
Ribosome biogenesis [BR:ptu03009]
 Eukaryotic type
  Pre-60S particles
   RNases
    PTUN_a0674 (orn)
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: ATC93435
LinkDB
Position
I:638765..639310
AA seq 181 aa
MSFHESNLIWLDLEMTGLEPKTDKILEIATIVTDCDLNILAEGPVIAVHQSDELLDGMDE
WCVKQHGGSGLTARCRQSSFTEQDAIEQTISFLEKWVPKGKSPMCGNSIGQDRRFLNAYM
PELEDYFHYRNLDISTIKELARRWKPEVLNSIKKKGVHLALEDIHESIAELRVYRQDFFK
L
NT seq 546 nt   +upstreamnt  +downstreamnt
atgtcttttcatgaatcaaatttgatttggctagatctcgaaatgacgggtttagaacca
aaaacggataaaatactcgaaatcgcaactatcgttactgattgtgatttaaatatatta
gcagaaggcccggtaatcgctgttcatcaatctgatgagttgttggatgggatggatgag
tggtgtgtcaaacagcatggtggttctggtttaaccgcgcgttgcagacaaagttctttt
accgaacaagatgcgattgagcagacgatcagctttttggagaaatgggtaccgaaaggg
aagtcgccaatgtgcggaaactctattggccaagaccgtcgttttttaaatgcatatatg
cctgagctggaagattatttccattatcgtaatcttgatatcagtacaataaaagagctt
gctcgccgctggaagccggaagtgcttaatagtattaagaaaaaaggtgtgcatttagct
ttggaagatattcacgaatcgattgctgaactacgtgtttatcgtcaagatttctttaag
ttataa

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