Pseudoalteromonas tunicata: PTUN_a1431
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Entry
PTUN_a1431 CDS
T05187
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PTUN_a1431 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptu03019
]
PTUN_a1431 (recQ)
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a1431 (recQ)
Enzymes [BR:
ptu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PTUN_a1431 (recQ)
Messenger RNA biogenesis [BR:
ptu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PTUN_a1431 (recQ)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PTUN_a1431 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
ResIII
TniB
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATC94063
LinkDB
All DBs
Position
I:1311491..1313437
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AA seq
648 aa
AA seq
DB search
MKSLDSQLAHYFGFNEFRQGQFETISTLLAQRSALAIFPTGSGKSLCYQLSALLLPHLTL
VVSPLIALMHDQLHFLQSKGVAAASLDSTLNADESRDVMAKVQKGEIKILMVSVERFKNE
RFRQFLAGLKISMLVVDEAHCISEWGHNFRPDYLKLPQYREQLAIPLVLLLTATATKKVK
LDMAKRFAIEPTDIIQTGFYRQNLALSVLPVLEYAKNTVLIEQIRQQRGAGIVYVTLQKT
AMEVAQLLQSANVNAVAYHAGLDDEVRGHILRDFMANKIDVVVATIAFGMGVDKANIRFV
IHYDLPKSIENYSQEIGRAGRDGQSSQCITLANLDGINVVENFVYGDTPEPDSIAKLIEL
LKTTTIQGVWELQDNPLASETNIRLLPLKTLLVQLELKGVITAKYSYFADFKYKLLVEKQ
QLLNQFDPERQAFLVMILSYTQFKKVWGTLDFVQLLNEPNIERERVVNALDYLHQQQLIE
LETKKITHVYQVNQQALADPNLVNELIRYFNEKEQAEIKRIAALVRFFQLDKCLSANLAR
YFDDQQAPAQCNTCSVCLGSVATLAYSSHPELPNDDILIRYLHELKQLCKSKVNQPLSDK
SYARFLAGITTPLFTRLKVRQLAGFASCESIRFADLVQKVSTLQLNEF
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccctcgactcgcaattagcacattattttggttttaatgaatttcgccaaggt
cagtttgaaacaataagcactttgctggcacagcgttcagcattagcaattttccctacc
ggttcagggaaatcactttgttatcaacttagcgcattattattacctcacttgacctta
gtggtttccccattaattgctttaatgcacgatcaattacattttttgcaaagtaagggg
gttgctgccgcgagcctagattcaaccctaaacgcagatgaaagtcgtgacgtgatggct
aaagtgcaaaaaggtgaaatcaaaatattaatggtctcggtcgaacgttttaagaatgaa
cgatttcgccagtttttagcgggattaaaaatctcaatgctggtggttgatgaagcgcac
tgtatttctgaatggggtcataactttcgccctgattacttgaaacttcctcaatatcgc
gagcaattagcaatccctttggttttattattaaccgcaacggcaactaaaaaagtaaag
cttgatatggcaaagcgttttgcgattgagccaactgatattattcaaactgggttttat
cgacaaaatttagcgctaagtgtattaccagtattagaatatgctaaaaacaccgtatta
atcgaacaaattcgacaacaacgtggtgcaggcattgtgtatgttacgttacaaaaaacc
gccatggaggttgcacaattactgcaatcggccaatgtaaatgcagttgcttatcatgct
ggtttagatgatgaagttcgaggtcatattctacgcgattttatggccaataaaatagac
gttgtggtagctactattgcatttgggatgggggtagataaagccaatattcggtttgtg
atccattatgacttacctaaatcaattgaaaactatagccaagaaataggccgagcaggg
cgtgatggtcaatcaagtcaatgtattacgcttgctaatttagatggcattaatgtagtt
gaaaattttgtttatggcgatacaccagagccagatagcatagctaaactaattgaattg
cttaaaaccacgactattcaaggagtttgggagctacaagataatccattagccagtgaa
accaatattcgtcttttacctctgaaaacgcttttggttcagttagaattaaaaggcgtc
attacagcaaaatactcttattttgctgatttcaaatataagttacttgttgagaaacag
cagttgctaaatcagtttgatcccgagcggcaagcttttcttgtgatgattttaagttat
acccaatttaaaaaagtgtggggaacactagactttgttcagctactgaatgagccaaat
atagaacgggagcgagtggtgaatgctcttgattatttgcatcaacagcaacttattgaa
ctcgaaactaaaaaaataacccatgtttatcaggttaatcaacaagctttagccgatcca
aatttggtaaatgagttgattcgttattttaatgaaaaagagcaagcagaaattaagcgc
attgctgctttagtgcgattttttcaactcgataaatgcttaagtgctaacttagcgcgt
tattttgatgatcagcaagcgccagcacaatgtaatacatgttcggtgtgtctcggtagc
gtagctactttggcttactcttcgcatcctgagttacccaatgatgacatcctaataaga
tatttacatgagttaaaacagctttgtaagagtaaggttaatcagccacttagtgataaa
agctatgcccgatttttagccgggatcacaacaccgttatttacccgccttaaagtgagg
caactcgcaggatttgccagctgtgagtcaatccgatttgcagacttagtacaaaaagtt
tcaacattgcagctaaatgaattttag
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