Pseudoalteromonas tunicata: PTUN_a2495
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Entry
PTUN_a2495 CDS
T05187
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
ptu
Pseudoalteromonas tunicata
Pathway
ptu03030
DNA replication
ptu03430
Mismatch repair
ptu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ptu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PTUN_a2495 (holB)
03430 Mismatch repair
PTUN_a2495 (holB)
03440 Homologous recombination
PTUN_a2495 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptu03032
]
PTUN_a2495 (holB)
03400 DNA repair and recombination proteins [BR:
ptu03400
]
PTUN_a2495 (holB)
Enzymes [BR:
ptu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PTUN_a2495 (holB)
DNA replication proteins [BR:
ptu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PTUN_a2495 (holB)
DNA repair and recombination proteins [BR:
ptu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PTUN_a2495 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
AAA_5
nSTAND3
AAA_14
Bunya_G1
Motif
Other DBs
NCBI-ProteinID:
ATC94965
LinkDB
All DBs
Position
I:complement(2309851..2310759)
Genome browser
AA seq
302 aa
AA seq
DB search
MIYPWLGASHQMLADASQNKKLHHALLLQGVQGIGKQTMAVHLAGALLCPNQQNLTACGQ
CKSCHLLAAQSHPDYLVLGHEQKTIGVDEVRKIADFCQTSAGQRGAKVVVVNDADLMTTA
AANALLKTLEEPANNRFLILVSAQAERLPATVLSRCSQVTLSVDDAQLVEQWMAETDSKI
DWQSWQHLFLHQPLLLLKWQQNEDHTILTNLYELVQQLKNGISAQLLVDILQQKSEYSSV
FYIFVCDYVKQALLKQQLDFKAYQICLQHLLNFQQAVKQVLGLNFPLAVSDLVFALQQQL
KR
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgatttacccttggcttggtgcttcgcatcagatgttggcagatgcttctcaaaataag
aaattgcatcatgcgctgctgttacaaggtgtacaagggattggtaaacaaaccatggct
gtgcatcttgctggtgcattgctgtgcccaaatcagcagaatctaacagcatgtggtcaa
tgtaaatcatgtcatttacttgcagcgcagagtcatcctgattatttagttttaggccat
gaacaaaagacgattggtgtcgatgaagtacgaaaaattgctgatttctgccaaacgtca
gcaggacaacgcggtgcaaaagtcgtggttgtgaatgatgcagatttaatgactaccgca
gcagctaatgcgttgctaaaaacattagaagagcctgcaaacaaccgatttctaatttta
gtatcagcgcaagctgagcgcttgcctgccactgtgcttagccgctgcagtcaagtgaca
ttaagtgttgatgatgcgcaattagtcgagcaatggatggctgaaaccgactctaaaatt
gattggcaaagctggcaacatctgttcctacatcagcctttattattattaaaatggcag
caaaatgaagatcacactattcttactaatctgtatgaattagtccaacaactaaaaaat
ggcatctcggcacagttacttgttgatattttgcaacaaaaatcagaatatagcagcgtg
ttttatatcttcgtttgtgattatgtaaaacaagccttactcaaacaacaactcgatttt
aaggcttaccaaatttgtttacagcatttattgaattttcaacaagcggtaaaacaagtt
ttggggttaaattttccactggcagtcagtgatttagtgtttgctttacagcagcaattg
aaacgttag
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