KEGG   Pseudoalteromonas tunicata: PTUN_a3619
Entry
PTUN_a3619        CDS       T05187                                 
Symbol
rpoE
Name
(GenBank) RNA polymerase sigma-70 factor, ECF subfamily
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
ptu  Pseudoalteromonas tunicata
Brite
KEGG Orthology (KO) [BR:ptu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ptu03021]
    PTUN_a3619 (rpoE)
Transcription machinery [BR:ptu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PTUN_a3619 (rpoE)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_16 Sigma70_ECF DUF1854 DHH_CID
Other DBs
NCBI-ProteinID: ATC95917
LinkDB
Position
I:complement(3335362..3335901)
AA seq 179 aa
MFFQSEQGLIHKAKQGNKKAWFKLVKQHESVIYHYCLRMLGNQEDAIDLMQEVFLSIYKS
LDSFRFDSSFKTWIICIANRRCIEFYRKRKIELHNEEEMDSFIDVQNQNPEQQLQGSQHN
QHVIAAMNTLNVEQRSVIELKFFHHYTLEQIGELQNISTNTVKSRFYAALENLKPHLEA
NT seq 540 nt   +upstreamnt  +downstreamnt
gtgttttttcaatcagaacaagggttaatacataaagcaaagcaaggaaataaaaaggcg
tggtttaagctggttaaacagcatgaatcggtcatttatcattattgtttacgcatgttg
ggtaaccaagaagatgcaatcgatctgatgcaagaggtatttttaagcatttataaaagc
ttagatagtttccgctttgatagcagctttaaaacgtggattatttgcattgctaatcgt
cgttgtattgaattttatcgcaaacgaaaaattgagttacacaatgaagaagagatggat
tcgtttattgatgttcaaaaccagaaccctgagcagcaactgcaaggcagtcaacataat
caacatgttatagcggctatgaatacgctcaatgttgagcagcgcagtgttatagagctt
aagttttttcatcactacacacttgaacaaattggcgaattgcaaaatatttcaactaat
acggttaaatcccgtttttatgctgcgttagaaaatttaaaaccccatttggaggcttag

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