Candidatus Pelagibacter ubique: SAR11_0817
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Entry
SAR11_0817 CDS
T00257
Symbol
hupA
Name
(GenBank) non-specific DNA-binding protein HBsu
KO
K03530
DNA-binding protein HU-beta
Organism
pub
Candidatus Pelagibacter ubique
Brite
KEGG Orthology (KO) [BR:
pub00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pub03032
]
SAR11_0817 (hupA)
03036 Chromosome and associated proteins [BR:
pub03036
]
SAR11_0817 (hupA)
03400 DNA repair and recombination proteins [BR:
pub03400
]
SAR11_0817 (hupA)
DNA replication proteins [BR:
pub03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAR11_0817 (hupA)
Chromosome and associated proteins [BR:
pub03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
SAR11_0817 (hupA)
DNA repair and recombination proteins [BR:
pub03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
SAR11_0817 (hupA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
CshA_repeat
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AAZ21634
UniProt:
Q4FMF5
LinkDB
All DBs
Position
791591..791866
Genome browser
AA seq
91 aa
AA seq
DB search
MNKKQLIAQLSGSLNLSKADAERTFDTITNTILDALKGDDTVKIAGFGTYKVAKRKARVG
RNPRTGEQIQIGASQKVKFLPAKALKEIFNK
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaacaattaatagcacaactttcaggttctttaaacctaagtaaagctgat
gctgagcgtacttttgatactattacaaacactattctagatgctttaaaaggtgacgat
acagtgaaaattgctggatttggaacttacaaagtagcaaaaagaaaagctagagttgga
agaaatcctagaactggagagcaaatccaaatcggtgcttctcaaaaagttaagttctta
ccagctaaggcacttaaagaaatatttaataagtaa
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