Pasteurella multocida subsp. multocida 3480: NT08PM_1151
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Entry
NT08PM_1151 CDS
T02057
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pul
Pasteurella multocida subsp. multocida 3480
Brite
KEGG Orthology (KO) [BR:
pul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pul03016
]
NT08PM_1151
Enzymes [BR:
pul01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NT08PM_1151
Transfer RNA biogenesis [BR:
pul03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NT08PM_1151
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
Motif
Other DBs
NCBI-ProteinID:
AFI46271
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All DBs
Position
1225480..1227456
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AA seq
658 aa
AA seq
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MFQNNPLLSQLKQQIRDSKQQVEGIVKGSDKSFGFLECDKKSYFIPPAAMKKVMHGDKIK
ALIEVVGEKEQAEPDALIEPMLTRFIACVRFNKDKKLQVLVDHPQINQAIGAAQDKSITE
TLQEGDWVLATLKTHPLRDDRFFFAQIQQFICRAEDELAPWWVTLARHGQSRYPVQGCAD
YPMIDQHTREDLTALHFITIDAETTLDMDDALYLEPIHQAEEQIGWRLVVAVADPTAYIP
LDSQIEQEARQRCFTNYLPGFNIPMLPPELSDERCSLMQDEIRPALVCYIETDLTGNITE
KPRFVSAYVQSKAKLAYDHVSDYLENRLDAWQPENPQIAQQIQWLHQFTQARIEWRKQHA
LLFKEKPDYSFILAENGSVQAIQAQYRRIANQMVEECMILANICAAHYLDEHAKCGIFNT
HSGFDKKYLESAHQFLLNQLSDETNQAVLATRYSVANLTTLAGYCQMRHDIELLNSDYLE
LRLRRFLTFAEFKSEIAPHFGLGLSGYATWTSPIRKYSDMVNHRLIKAVLTQQTCEKPQD
DLFVRLQEARRQNRLVERDIADWLYCRYLATQVEQKPTFQAEIQDVMRGGLRVQLLANGA
PMFIPASLIHDNKEAIQVNTDTLTLSIQGEVKYKLGDIIQVQLLDVKEETRSIVGTLC
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgttccaaaataatcccctcctttcacaattaaaacaacaaatccgagacagcaaacaa
caagtcgaaggtatcgtaaaaggttcagataaatcctttggttttcttgagtgtgataaa
aaaagttactttattccccctgctgcgatgaagaaagtcatgcatggtgacaaaatcaaa
gccctgattgaagtcgttggtgaaaaagaacaagccgaacccgatgccttaattgagcca
atgctcacccgctttatcgcgtgtgtgcgtttcaataaagataaaaaattacaagtgctc
gtcgatcatccacaaatcaatcaagccattggtgctgcccaagataaatcaataacagaa
acgttacaagaaggggattgggtccttgctactttaaaaacacacccattacgtgatgac
agattctttttcgctcaaattcagcaatttatttgccgtgcagaagatgaactcgcgcct
tggtgggtcacgctagcacgtcatggacaatcgcgttatcctgtgcaaggttgtgcagat
tatccaatgatagatcaacatacacgtgaagatttgaccgcattgcattttatcaccatt
gatgcggaaacgacgttggacatggatgatgcgctttaccttgagcctattcatcaagcg
gaggaacagattggttggcgtttagtggtcgccgttgctgatccaactgcttatatcccg
cttgattcacaaattgaacaagaagccagacaacggtgttttaccaattatctaccgggc
ttcaacattccaatgttaccaccggaattgtctgatgaacgttgttctttaatgcaagac
gaaattcgtccggcgttggtctgctatatcgaaaccgatttaaccggtaatatcactgaa
aaaccgcgctttgtttccgcttatgtacaatccaaagcgaaattagcctatgatcacgtc
tctgattatttagaaaatcgtcttgatgcatggcagcctgaaaatccacaaatcgcacaa
caaatccaatggcttcatcaatttactcaagcacgcatcgagtggcgtaaacaacatgct
ttgttatttaaagaaaagccagactattcgtttatcttagcagagaatggcagcgtacaa
gccattcaagcacaatatcgtcgcattgcgaatcaaatggtagaggaatgtatgattctc
gccaacatttgtgctgcacactatctcgatgaacatgctaagtgcggtatttttaatacg
cattctggttttgataaaaaatacctagagagtgcacatcaatttttattaaatcagtta
agtgatgaaacaaaccaagccgtcttagcaacacgttattctgtagcgaatttaacaaca
ttagcgggctattgccaaatgcgccatgatattgagttattaaatagtgactatctcgaa
ttgcgtttacgtcgtttcttaacatttgctgaatttaaatctgaaatcgcaccgcacttt
ggtttaggcttatcgggttatgcgacctggacatccccgattcgtaaatattccgatatg
gtcaatcatcgcttaattaaagctgtgttaacccaacaaacttgtgagaaaccgcaagat
gacctgttcgtacgtttgcaagaagcgcgtcgtcaaaaccgtttagtagagcgtgatatt
gcagattggctttattgtcgttatttagcaacacaagtggaacaaaaaccaacattccaa
gcggaaattcaagatgtgatgcgagggggattacgtgtgcaactgcttgctaatggtgcg
ccgatgtttatccctgcctccttaattcacgacaataaggaagcgattcaagtcaatacg
gatacgcttactctgtctattcaaggtgaagtgaaatataaattaggagatatcattcag
gtgcaactcttggacgtgaaagaagaaacgcgtagtattgtcggcactctttgttaa
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