Pseudomonas umsongensis: HGP31_08200
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Entry
HGP31_08200 CDS
T06842
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
pum
Pseudomonas umsongensis
Pathway
pum02020
Two-component system
pum02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pum00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HGP31_08200
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HGP31_08200
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pum02022
]
HGP31_08200
02035 Bacterial motility proteins [BR:
pum02035
]
HGP31_08200
Two-component system [BR:
pum02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
HGP31_08200
Bacterial motility proteins [BR:
pum02035
]
Flagellar system
Flagellar assembly proteins
Others
HGP31_08200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
MCM
AAA_2
AAA
AAA_3
HTH_30
FleQ
MerR
HTH_20
AAA_19
HTH_24
HTH_28
nSTAND3
Sigma70_r4_2
DUF2249
HTH_23
HTH_11
AAA_7
AAA_22
HTH_17
HTH_1
Myosin_head
AAA_14
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
QJC78290
LinkDB
All DBs
Position
1809496..1810881
Genome browser
AA seq
461 aa
AA seq
DB search
MAIKVLLVEDDRALREALADTLLLAGHDYKAVASAQEALEAAAGEAFNLVVSDVNMPGMD
GHQLLALLRARQPQLPVLLMTAHGAVERAVDAMRQGAADYLVKPFEPKALLDLVARHAQG
RVGATDGEGPVAFEPASAQLLELAARVARSDSTVLISGESGTGKEVLARYIHQHSHRASQ
PFIAINCAAIPDNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQA
KLLRVLQEREVERVGARKPIALDIRVVATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRP
LRERTADILPLAERLLARHVNKMKHAAARLSPAAQACLIAYPWPGNVRELDNALQRALIL
QQGGVIEPQDFCLNGPIACAPLPALAPAPTTVRAVEAESGGGLGDDLRRREFQMIIDTLR
TERGRRKEAAERLGISPRTLRYKLAQMRDAGMDVEAYLFAT
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaggttctactggtcgaggatgaccgcgcgttgcgtgaagcgctggcagac
acgctgttgctggccggccacgattacaaggccgtggcatcggcgcaggaagctctggag
gccgcagcgggcgaggcgttcaatctggtggtcagcgacgtcaacatgccgggcatggat
ggtcatcagttgctcgctttgctgcgggcgcgacagccgcaactgccggtgctgctgatg
acggcgcacggtgccgtcgagcgcgcggtggatgcgatgcgccaaggggcggcggattac
ctggtcaagccgttcgagcccaaggcgctgctcgacctggtcgcacggcacgcccagggt
agggtcggcgccaccgatggcgaagggcccgtggcgttcgagccggccagtgcacagttg
ctggagttggccgcgcgggtggcgcgcagtgattccacggtgctgatctccggtgagtcc
ggcaccggcaaggaagtgctggcgcgctacattcaccagcactctcatcgggccagtcag
ccgttcattgcgatcaactgcgcggcgattccggacaacatgctggaggccacgctcttc
gggcacgaaaagggctcgttcaccggcgccatcgcggcgcaggccggcaagttcgaacag
gccgatggcgggacgatcctgctcgatgaaatttccgaaatgcccttggggttgcaggcc
aagttgctgcgggtgctgcaggagcgcgaggttgagcgagtaggtgcgcgcaagccgata
gccctggatatccgcgtggtcgcgaccaccaaccgggacttggcgggtgaggtggcggcg
gggcgttttcgtgaagacctgtactatcgcctgtcggtgttcccgctggcctggcggccg
ttgcgcgagcgcaccgccgatatcctgccgctggccgagcgactgttggccaggcacgtc
aataaaatgaagcatgccgcggccaggctgtcgcccgcggcccaggcgtgcctgatcgct
tatccgtggccgggcaacgtgcgtgaactggacaatgcgctgcagcgtgcgttgatcctg
cagcagggcggggtgatcgagccgcaggatttctgcctgaacggaccgatcgcctgcgca
ccgttgccggcattggcgcccgcgccgacgacagtgcgggcggtcgaggccgaatctggc
ggcgggttgggcgacgacctgcggcgccgtgagttccagatgatcatcgacaccttgcgc
accgagcgcggccgccgcaaagaggccgccgagcgcctgggcatcagcccgcgcaccttg
cgctacaagctggcgcagatgcgcgatgccggaatggacgtggaagcgtatttgtttgcc
acctga
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