Psychrobacter urativorans: AOC03_10460
Help
Entry
AOC03_10460 CDS
T04087
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pur
Psychrobacter urativorans
Brite
KEGG Orthology (KO) [BR:
pur00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pur03016
]
AOC03_10460
Enzymes [BR:
pur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AOC03_10460
Transfer RNA biogenesis [BR:
pur03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AOC03_10460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
ALF60413
UniProt:
A0A0M3V966
LinkDB
All DBs
Position
2416794..2418134
Genome browser
AA seq
446 aa
AA seq
DB search
MSDHSLASNAQSNHSHSSITTDTIQNTSHHIAPKDSVCANDASIMLPSEPDIDALLDAAD
ELPVTWIKQQYQLDEVIDALEGCGRVALDTEFIKRDTYYPRLALVQINTGDHIYLLDAPQ
LQLGELWQALSEVDVAIWHACGEDLGIFYLLSDCPPLTNIFDTQIALSYLTGQLQMGYQQ
ALDDQLDMHIDKEHSQSDWLRRPLSDEQEQYAIDDVRFLPALYLSIEHALKSQGLYDYVW
ADCQLYAHELYKAQNVEDEDMYLTMADYRYTAEQMAILQAVATWREELARATNQPRTFVI
KKQAVREIITEKPSNMRELAHKTTIHRSMLRLYGDELMTVINKAKMLSPTEYPACLLPPY
RSKNKVLSKAVEAAIAERAEQIGVPENVLMRKKWLGQLYEVIAFDKDFSELPQGLTDWRY
EWVTQTLIPVIEAHKTELQQGMGINV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaccactctcttgcttcaaacgctcagtccaatcattctcattcctctataacg
acggatacgattcagaataccagtcaccatattgcgccaaaagactcggtatgtgccaat
gacgcatcaataatgctgccgtcagagccggatattgatgccttgttagatgcagcggat
gagttgcccgtaacgtggataaagcagcagtaccagcttgatgaggttattgatgcctta
gaaggttgcggacgcgtggcgttagatacggagtttattaagcgtgatacgtattatcca
cgcttggctttggtgcaaattaataccggcgatcatatctatttattagatgcaccacag
ctacagttgggtgaactttggcaggcgctgagcgaagtcgatgtggctatttggcatgct
tgtggggaagatttgggtattttttacttattatctgactgtccaccattgaccaatatt
tttgatacgcagattgcgttgtcttatttaacgggacaattgcaaatgggctatcagcag
gcgcttgatgatcagttggatatgcatattgataaagaacacagccagtcggattggctc
agacgtccgttatcagatgagcaagagcagtatgccattgatgatgtgcgctttttaccg
gcgttatatttaagtattgaacacgccctcaaatcgcaagggttgtacgattatgtgtgg
gcggattgtcagctttatgctcatgagctgtataaagcgcaaaatgttgaagatgaagac
atgtatctaacgatggcagattatcgttatactgcggagcaaatggcgatattgcaagcc
gtagcgacatggcgtgaagagctagcacgtgcaaccaatcagccgcgtacttttgtgatt
aaaaaacaagctgtacgcgagattattactgaaaaacccagtaatatgcgtgagcttgcg
cacaaaacgaccatacaccgtagtatgttgcgcctgtatggtgatgaattgatgacggtg
attaataaagcaaaaatgctgtcaccaaccgagtatccggcgtgtctattgccgccttat
cgttctaaaaataaagtattatcaaaagcggtagaagctgctattgctgagcgtgctgag
caaatcggtgtacctgaaaatgtgctgatgcgtaaaaaatggctcggtcaattgtacgaa
gtgattgccttcgataaagatttcagtgagttaccacaaggcttaacagactggcgctat
gaatgggtcacgcaaacgctaatccctgttatcgaagcacataaaacagagctacaacaa
ggtatggggattaacgtttaa
DBGET
integrated database retrieval system
