Pusillimonas sp. T7-7: PT7_0738
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Entry
PT7_0738 CDS
T01486
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
put
Pusillimonas sp. T7-7
Pathway
put03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
put00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PT7_0738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
put03400
]
PT7_0738
DNA repair and recombination proteins [BR:
put03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PT7_0738
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PT7_0738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
DEAD
UVR
AAA_30
Kinesin
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AEC19278
UniProt:
F4GPE6
LinkDB
All DBs
Position
831361..833394
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AA seq
677 aa
AA seq
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MSSMTATAPGFVQYPDSPFQLYQPYPPAGDQPTAIAALTEGMNDGLMYQTLLGVTGSGKT
YTMANVIARTGRPAIVLAPNKTLAAQLYAEMREFFPNNAVEYFVSYYDYYQPEAYVAARD
LFIEKDSSINEHIEQMRLSATKSLLERRDTIIVGTVSCIYGIGNPGDYHAMVLTLRSGDR
IARQELLGRLVAMQYERNDVEFTRGAFRARGEIIDVFPAEHAELALRITLFDDEIETLEM
FDPLTGKIKQKVPRFTVFPSSHYVTPRETVLRAIETIKEELRERSAVLVADGKLVEAQRL
EQRTRFDLEMLQELGFCKGIENYSRHLSGAAPGEPPPTLIDYLPADALMFIDESHVTMGQ
LSAMYRGDRSRKSTLVQFGFRLPSAMDNRPLQLEEFEQRMRQCVFVSATPANYEKEHSDN
VVEQVVRPTGLVDPVVEVRPALTQVDDLVGEIKLRIAVQERVLVTTLTKRMSEDLTDYLT
ENGLKVRYLHSDIDTVERVEIIRDLRLGVFDVLVGINLLREGLDIPEVSLVAILDADKEG
FLRSERSLIQTMGRAARNLNGKAILYADRITDSMYRAMGETERRRHKQLDFNKEHGITAR
GVSKAVREMIDGVMVDPAQASAADLISPDVLRDDKSLAKEIRRLEKLMMDHAKNLEFEQA
AAARDALNRLKQKALLS
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
gtgtccagcatgacagcaacagcacccggtttcgtccagtacccagacagcccgtttcag
ctgtatcagccgtatccgccggcgggcgatcagcccacggcgatcgccgcgctgaccgag
ggcatgaacgatggcctgatgtaccagaccctgcttggggtaacgggttcgggcaagacc
tacaccatggccaacgtgattgcccgtaccgggcgtccggccattgtgctggcccccaac
aaaacgctggcggcacagctgtacgctgaaatgcgcgagttttttcccaacaacgcggtt
gagtatttcgtgtcgtactacgattattaccagcccgaagcctacgtggcggcgcgcgat
ctgttcattgaaaaagactcgtccatcaacgaacacatcgagcaaatgcgtttgtcggcc
accaagagcctgttggaacggcgcgacacgatcatcgtgggcacggtgtcctgcatatac
ggtataggcaatccaggcgattatcacgccatggtgttgaccttgcgcagcggcgaccgt
attgctcgccaggaactgctggggcggctggtggccatgcagtacgaacgcaacgacgtc
gagttcacgcgtggcgcttttcgggcgcgaggcgagatcatcgacgtctttccggccgag
catgccgaactggccctgcgcattacgttattcgacgacgaaatcgaaacactggaaatg
ttcgacccgctcaccggcaagatcaagcagaaggtgcctcgttttacggtgttccccagt
tcgcactatgtgaccccgcgtgaaaccgtgttgcgcgccattgaaaccatcaaggaagag
ctgcgtgaaaggtcggccgtgttggtggctgatggcaagctggtcgaggcgcagcgcctg
gagcaacgcacacgcttcgatctggaaatgctgcaggaattgggtttttgcaaaggcatc
gagaactactcgcgccatttgtctggcgccgcgccgggcgagccgccacctacactgatt
gattacttgcccgccgacgccttgatgttcatcgatgaaagccacgtcaccatgggccag
ctcagcgccatgtaccggggtgaccgttcgcgcaagtccacgctggtgcagttcggcttt
cgcctgccctctgcgatggacaaccggccattgcagttagaggagttcgagcagcgcatg
cgtcagtgcgtgttcgtatcggccacgccggccaactacgaaaaagagcactccgacaat
gtggtcgagcaggtggtccggcctacgggcttggttgacccggtggtcgaagtccggccg
gcgctgacgcaggttgacgacttggtgggtgaaataaagctgcgcattgcggtgcaggag
cgcgtgctggtgacgacgctgaccaagcggatgtccgaagacctgacagattatttgaca
gaaaatggtttgaaagtgcgctatttgcattccgacatcgatacggtcgaacgagtggaa
atcattcgagacctgcggctgggtgtgtttgacgtactggtgggcatcaacttgctgcgc
gaggggctggatatacccgaagtgtcgttggtggctattctggatgccgacaaagaaggc
tttctgcgctctgagcgcagcctgatccagaccatggggcgggccgcgcgcaatctgaat
ggcaaggccattttgtatgccgaccgcatcaccgattccatgtaccgggccatgggcgaa
accgaaaggcgccgtcataaacagctggatttcaacaaagaacacggcattaccgcgcgc
ggcgtcagcaaggccgtgcgcgaaatgatcgatggcgtcatggtcgatccggcacaggcc
tcggcggcggatctgatctcgcccgatgtgctgcgcgacgacaaatccctggccaaggaa
atcaggcgcctggaaaaattgatgatggaccacgccaagaatctggaattcgagcaggct
gccgcagcgcgcgatgccttgaaccgcttgaagcagaaagccttgctgtcttaa
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