KEGG   Pusillimonas sp. T7-7: PT7_2025
Entry
PT7_2025          CDS       T01486                                 
Name
(GenBank) excinuclease ABC subunit
  KO
K03701  excinuclease ABC subunit A
Organism
put  Pusillimonas sp. T7-7
Pathway
put03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:put00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PT7_2025
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:put03400]
    PT7_2025
DNA repair and recombination proteins [BR:put03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PT7_2025
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PT7_2025
SSDB
Motif
Pfam: UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_21 UvrA_DNA-bind RsgA_GTPase AAA_22 Viral_helicase1 AAA_18 NACHT AAA_33 nSTAND3 ATPase SbcC_Walker_B DnaJ_CXXCXGXG NMDAR2_C
Other DBs
NCBI-ProteinID: AEC20565
UniProt: F4GPP5
LinkDB
Position
2157725..2163460
AA seq 1911 aa
MSSHIRIFGARQNNLKNLDVSINTGELLVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVERIEGILPAIAIDQVNPVRNSRSTVGTMTELNDHLKLLFARLGRLY
CQCCGQHVQRDDAQSIQQQLAARAPEAGDPRLIITFPIIVPANYTEEEVRGFLEQQGYTR
IHHEEVRLHTPAPAKSKGKGKRTPKAEKLRVLHVVQDRFRYGSAEPERVMEALDTALKQG
DGHIAIHALPDSDKEDNQETIWRFSNRLHCAACNIEYSTPLPSTFSFNSPLGACESCRGF
GRVMGIDYGLVVPDEKKTLRQGAIKPWQTNSYKECQTEMEQYAPAAGIRLDTPWQDLTEE
ERRWVIDGTPDWKGGNNAWKTQWYGAQRFFDWLESRAYKMHVRVLLSKYRSYTPCPACGG
ARLKPDATLWRLGSVAGNTDGAYPRFMPVHAQWSRAQLDALPGLGIHDLMRLPISRVRDY
FLDISFGAQMDAAIDLLLNEVRTRLKFLCDVGLGYLSLDRQSRTLSGGEVQRINLTTALG
TSLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRANGNTLVVVEHDPQVMIAADRIMDMGP
GPGERGGQVVFDGTPAQLRNADTLTGNYLGSRLRVEAPRPMPVAANTPRLVLEGARANNL
QNVSLSIPLGRLVCVTGVSGSGKSTLIQDVLYPALLKQQGKPTEAPGEYDHLLGAEQLAD
VVMVDQTPIGKTARSNPASYVGAFDAIRKLFAQAPISKERGYTAGTFSFNTGDGRCPTCG
GTGFEHVEMQFLSDVYLRCPDCDGKRFRPEIREVRVEHLGRNASIDEVLEMTISEALAFF
SGLRDVQWALAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAAAARSGISSAKVAKK
GSLFLFDEPTTGLHFDDVARLMRAFRKLLAAGHSLLIIEHNLDVIRAADWLIDLGPEGGD
AGGRIVGVGTPQDLVFNKESHTGQALADYTSAIVYEDKSQQARQLAEPTPRYQNAAGTPL
QTVVRRRHGQGLSIDMVNAREHNLKGINVSIPHDTFTVITGVSGSGKSTLAFDILFNEGQ
RRYLESLNAYARAIVQPAGKPDVDAIYGIPPTVAIEQRTSRGGRKSTVATMTEIHHFLRL
LYVKLGTQMCPTCNVAVEPQKAEQIVAQILRDYKGRHIGILAPLVSARKGYYTDLAKWAA
GKGHSHLRVDGEFVPVSPWPRLDRYKEHTIELPVADLIINPKNEATLREAVREALEHGQG
SMSILLDVSTTQADSLDERRSATPNASAEQRHFSVKRACPSCGTSFPEPDPRMFSYNSKH
GWCNSCFGTGLQLAGFDAEQTGEETAWNAWYEGNVETCSSCHGERLNPVSRAFLWRGRSI
AELAAMPVSDAQSFFDGLIIRGREGEITRDILSEIKGRLSFMREVGLGYLALDRAAPTLS
GGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHSRDNQILLNALASLEGNGNTLVVVEHDE
DTIRRASHIIDIGPGAGTRGGMVVAQGTAQDLMDNPASVTGRYLKHPLQHPLQPRRAITD
ETALITVQSAHLHNLHNVNAQLPVGRLSVVTGVSGSGKSTLARDVLLENLSQAVSQRKDP
AWHGCTGITGWQAIDRVLEVDQTPIGKTPRSCPATYVGFWDDVRKLFADTREARIRGWTA
ARFSFNTGEGRCPVCEGQGMRTIEMSFLPDVKVLCDGCNGERFNRDTLGVTWRGKNAGEV
LKMEVDEAVEFFAAHSRISRILQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVAELAKAR
LTEGVIKTGRASRIPHTLYVLDEPTVGLSTADVEKLIHVLHRLVDADNTVLVIEHNLDIV
AEADWILDLGPEGGNGGGRLVAQGSPEQVMGMKTVSHTGAALATFLKQAQG
NT seq 5736 nt   +upstreamnt  +downstreamnt
atgagctcacatatccgcattttcggcgcacgccagaacaacctcaagaaccttgatgtt
tccatcaataccggcgaactgctggtcgtgacgggtgtttcggggtcaggcaaaagttcg
ctggctttcgataccctttatgccgaaggccagcgccgctacgtagaaaccttctcgccc
tacgctcgacaatttctagaccgtatggacaagcctcaggtcgaacgtatcgaaggcata
ttgcccgccattgccatagatcaggtcaatccggtacgcaattcgcgcagcaccgtgggc
accatgacagagctgaacgaccatctgaaattgctgtttgcgcgactcggacgactatat
tgccagtgctgcggccagcacgtgcagcgagacgatgcgcaatccatacaacagcaattg
gccgcacgcgcacccgaagccggtgaccctcgcctgatcatcaccttcccgatcattgtc
ccggccaactacaccgaagaagaggtgcgcggctttctggagcaacaaggctacacgcgc
atccaccatgaagaagtccgcctgcatacgcccgctccggccaaaagcaaaggaaaaggc
aagcgcacacccaaggccgaaaaactgcgtgtactgcatgtggtgcaagaccgtttccgt
tatggctccgccgaacccgagcgcgttatggaagcgctggacaccgccctgaagcagggc
gatggccacatcgcgattcacgccctgcccgactcagacaaggaagacaatcaggaaacc
atatggcgcttcagcaaccgcctgcactgtgccgcctgcaatattgaatacagcacgcca
ctgcccagcactttttcattcaactcgcccttgggcgcctgcgaatcatgccggggcttc
gggcgtgtcatgggcatagactacggcctggtcgtacccgacgaaaagaagacactgcgc
cagggcgccatcaaaccctggcaaaccaacagctacaaagaatgccagacggaaatggag
caatatgctcccgctgcgggcatacgcctcgatacgccctggcaagacctcactgaagaa
gaaaggcgctgggtgatcgatggcacacccgactggaaaggcggcaacaacgcctggaaa
acgcagtggtatggtgcacagcgattctttgactggctggagtctcgcgcctacaaaatg
cacgtgcgcgtgctgctttcaaagtaccgcagctatacgccctgccccgcttgtggcggc
gcccggctcaaacccgacgccacactatggcgactgggcagcgtggccggaaacacagac
ggcgcttatccgcgtttcatgccggtgcacgcgcaatggagccgtgcacaactcgatgcc
ctgccagggctgggcatccacgatctgatgcgtctacccatcagtcgtgtacgcgactat
ttcctggacatcagctttggcgcccagatggacgccgctatcgacctgctgctgaatgag
gtccgcactcgcctcaaatttctgtgcgatgtgggtctgggttatttgtcgctggatcgc
cagagccgtacgctgtcgggcggagaagtccagcgcatcaacctcacgacagcgctgggg
acctcgctggtcaacacattatttgtgctcgacgaaccctccatcggcctgcacccgcgc
gacatgcaccgtgtggtggaagtcatgcaccgcctgcgcgccaacggcaacactctagtg
gtggttgaacacgatccgcaagtcatgattgccgccgaccgcatcatggatatgggtccc
ggcccgggcgagcgcggcggccaagtcgtcttcgacggtacgccagcgcaactgcgcaat
gccgacacgctgacaggaaactacctgggcagtcgcctgcgcgtcgaagcgccgcgcccc
atgcctgtggccgccaacacgccacgtctcgttcttgaaggcgccagggccaacaacctt
caaaacgtatccttgtcgataccgctggggcgcctggtctgcgtgacaggcgtatcgggt
tcgggcaagtcgaccctgatccaggatgtcctctatccggccctactcaaacaacagggc
aagcctactgaagcgccgggtgaatatgatcacctgctgggtgcggagcaactggccgac
gtcgtcatggtggaccaaacccccataggcaagacagcgcgctccaaccccgcaagctac
gtcggcgccttcgacgccatacgcaaactgttcgcccaagccccgatatccaaagagcga
ggctatacggcaggaaccttcagcttcaacaccggcgatggacgctgcccaacttgcggc
ggtaccggctttgagcatgtcgagatgcaattcctgtcggatgtatacctgcgctgcccc
gactgcgatggtaaacgcttccgtcccgaaattcgggaggtgcgggtcgaacatctgggc
cgcaacgcttcgatcgacgaagtcctggaaatgaccatcagcgaagccctggcattcttc
agcggcctgcgcgacgtccagtgggcgctggcccctctggccgacgtggggctggagtat
gtgcgcctgggccagccggtgcctacgctgtctggcggcgaggcccagcgactcaagctg
gccggccacctggctgcagcggcacgcagcggtatctcgtcggccaaagtcgccaagaaa
ggcagtctgtttttattcgatgagcccacgacaggcctgcactttgacgatgtagcccgc
ctgatgcgtgctttccgcaagctgctggcggccggccactcattgttgattatcgaacac
aacctggacgtcattcgtgcggcggactggctgatcgacctgggccccgagggcggcgac
gcgggtggccgcattgtcggcgttggcaccccccaagatcttgtattcaacaaagagtcg
catacgggccaggcgctggccgactacacaagcgccatcgtctacgaagacaaatcgcaa
caagccagacagttggccgagcctacgccacgctaccagaatgcagccggcacaccactg
caaaccgtcgtacggcgccgacacggccaggggctgagcatagacatggtcaatgcccgc
gagcacaacctgaaaggcatcaacgtcagcattccgcacgatacctttaccgtgattacg
ggcgtgtcgggttccggcaaatccaccctggccttcgacatcctgttcaatgaagggcag
cgccgctatctggaatcgcttaatgcctatgcccgagccatcgtgcagcccgcaggcaag
cccgacgtggatgccatttacggcatcccgcccaccgttgccattgaacagcgcaccagc
cgtggaggccgtaaatcgacggtcgccaccatgaccgagattcatcatttcctgcgcttg
ctgtatgtcaagctgggcacgcagatgtgccctacctgcaatgtggccgtcgaaccgcag
aaggctgaacaaatcgtcgcccaaatcctgagagactacaaaggccgacatataggcata
ctggcgccgctggtcagcgcacgcaagggctactacaccgatctggccaaatgggccgcc
ggcaaaggtcactctcatttacgagttgatggtgagttcgtaccagtgtcaccctggcca
cggctggatcggtataaagagcacactattgagttgcccgtagctgatttgatcatcaat
cccaagaatgaggcaacgctgcgtgaagctgtgcgcgaagcgctggagcatggccagggc
tccatgagcatattgctggatgtctctacaacgcaggccgacagcctggacgagcgccgc
agcgcaacgcccaacgcctccgccgaacaaaggcatttttcggtcaaacgggcctgcccc
agctgcggcacaagctttcctgaacccgatccgcgcatgttcagctacaactccaagcat
ggctggtgcaacagctgctttggcacgggcctgcaattggcgggcttcgacgccgaacaa
acgggcgaggaaaccgcctggaacgcctggtacgaaggcaatgtggaaacctgctccagc
tgtcatggcgagcgccttaacccagtctccagggcattcctatggcgcggacgctccatt
gccgagctggcagccatgcccgtatccgacgcacaaagctttttcgacggcctgatcatc
cgcgggcgcgaaggcgaaatcacccgcgacattctttctgaaatcaaggggcggctcagc
ttcatgcgggaagtcggcctgggctatctggcgctggaccgtgccgcccccaccctgtcg
ggcggcgaagcacagcgcatacggctggccgctcagttgggttccaacctgcagggcgtg
tgctacgtactggacgaacccaccataggcctgcactcgcgcgacaaccagatcttgctc
aatgccctggcatcgctcgaaggcaacggcaacacactggtggtggtcgagcacgacgaa
gacaccatacggcgggcctcgcatattatcgacataggccccggagccggtacgcgcggc
ggcatggtggtggcgcagggcacggctcaagacctgatggacaacccggcatccgtcaca
ggccgctacctgaagcaccccttgcaacaccccttgcagccgcgccgcgccatcacagac
gagaccgccctgatcaccgtccagagcgcgcacttgcataacctgcacaatgtcaatgcg
cagctgccagtcggtcgtttgagcgtggtgacaggcgtgtcgggatcgggcaaatccacg
ctggcacgcgacgtactgcttgaaaatctttcgcaagcggtatctcagcgcaaagatccg
gcatggcatggctgcacgggcattaccggctggcaggccatagaccgcgtgctggaagtt
gaccagactcccataggcaaaaccccacgctcctgtcctgccacctatgtaggcttctgg
gacgatgtacgcaagctgtttgccgatacacgcgaagccaggatacgcggctggactgcg
gcacgtttttcattcaacaccggtgaaggccgctgccccgtgtgcgaagggcaaggcatg
cgcaccatagaaatgagcttcctgcccgacgtcaaggtgttgtgtgacggctgcaatggc
gaacgcttcaaccgcgacaccctgggcgttacctggcgcggcaagaacgctggcgaagtg
ttgaagatggaagtggacgaggccgtggagttctttgctgcacattccagaatctcgcgc
attcttcaactgatgcaagacgtcggactgggctacctgacgctgggccagccctctccc
accctatcgggaggagaggcgcagcgcatcaaactggtggcggagctggccaaggcgcgc
ctgaccgagggcgtgatcaagaccggccgggcttcccggattccgcacacgctctatgtg
ctggatgagcccacagtgggcctgtctacggccgacgtcgagaaactgattcatgtgctg
catcgcctggtcgacgccgacaataccgtgctggtcatcgaacacaacctggacatcgtt
gcggaagccgactggatcctggacttgggtccggaaggaggaaacggcggcggacgcctg
gtggcgcaaggatcgcctgagcaagtgatgggcatgaaaacagtctcgcatacaggcgct
gcactggcaacattcctcaagcaggcgcaaggttga

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