Pusillimonas sp. T7-7: PT7_2025
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Entry
PT7_2025 CDS
T01486
Name
(GenBank) excinuclease ABC subunit
KO
K03701
excinuclease ABC subunit A
Organism
put
Pusillimonas sp. T7-7
Pathway
put03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
put00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PT7_2025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
put03400
]
PT7_2025
DNA repair and recombination proteins [BR:
put03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PT7_2025
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PT7_2025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_21
UvrA_DNA-bind
RsgA_GTPase
AAA_22
Viral_helicase1
AAA_18
NACHT
AAA_33
nSTAND3
ATPase
SbcC_Walker_B
DnaJ_CXXCXGXG
NMDAR2_C
Motif
Other DBs
NCBI-ProteinID:
AEC20565
UniProt:
F4GPP5
LinkDB
All DBs
Position
2157725..2163460
Genome browser
AA seq
1911 aa
AA seq
DB search
MSSHIRIFGARQNNLKNLDVSINTGELLVVTGVSGSGKSSLAFDTLYAEGQRRYVETFSP
YARQFLDRMDKPQVERIEGILPAIAIDQVNPVRNSRSTVGTMTELNDHLKLLFARLGRLY
CQCCGQHVQRDDAQSIQQQLAARAPEAGDPRLIITFPIIVPANYTEEEVRGFLEQQGYTR
IHHEEVRLHTPAPAKSKGKGKRTPKAEKLRVLHVVQDRFRYGSAEPERVMEALDTALKQG
DGHIAIHALPDSDKEDNQETIWRFSNRLHCAACNIEYSTPLPSTFSFNSPLGACESCRGF
GRVMGIDYGLVVPDEKKTLRQGAIKPWQTNSYKECQTEMEQYAPAAGIRLDTPWQDLTEE
ERRWVIDGTPDWKGGNNAWKTQWYGAQRFFDWLESRAYKMHVRVLLSKYRSYTPCPACGG
ARLKPDATLWRLGSVAGNTDGAYPRFMPVHAQWSRAQLDALPGLGIHDLMRLPISRVRDY
FLDISFGAQMDAAIDLLLNEVRTRLKFLCDVGLGYLSLDRQSRTLSGGEVQRINLTTALG
TSLVNTLFVLDEPSIGLHPRDMHRVVEVMHRLRANGNTLVVVEHDPQVMIAADRIMDMGP
GPGERGGQVVFDGTPAQLRNADTLTGNYLGSRLRVEAPRPMPVAANTPRLVLEGARANNL
QNVSLSIPLGRLVCVTGVSGSGKSTLIQDVLYPALLKQQGKPTEAPGEYDHLLGAEQLAD
VVMVDQTPIGKTARSNPASYVGAFDAIRKLFAQAPISKERGYTAGTFSFNTGDGRCPTCG
GTGFEHVEMQFLSDVYLRCPDCDGKRFRPEIREVRVEHLGRNASIDEVLEMTISEALAFF
SGLRDVQWALAPLADVGLEYVRLGQPVPTLSGGEAQRLKLAGHLAAAARSGISSAKVAKK
GSLFLFDEPTTGLHFDDVARLMRAFRKLLAAGHSLLIIEHNLDVIRAADWLIDLGPEGGD
AGGRIVGVGTPQDLVFNKESHTGQALADYTSAIVYEDKSQQARQLAEPTPRYQNAAGTPL
QTVVRRRHGQGLSIDMVNAREHNLKGINVSIPHDTFTVITGVSGSGKSTLAFDILFNEGQ
RRYLESLNAYARAIVQPAGKPDVDAIYGIPPTVAIEQRTSRGGRKSTVATMTEIHHFLRL
LYVKLGTQMCPTCNVAVEPQKAEQIVAQILRDYKGRHIGILAPLVSARKGYYTDLAKWAA
GKGHSHLRVDGEFVPVSPWPRLDRYKEHTIELPVADLIINPKNEATLREAVREALEHGQG
SMSILLDVSTTQADSLDERRSATPNASAEQRHFSVKRACPSCGTSFPEPDPRMFSYNSKH
GWCNSCFGTGLQLAGFDAEQTGEETAWNAWYEGNVETCSSCHGERLNPVSRAFLWRGRSI
AELAAMPVSDAQSFFDGLIIRGREGEITRDILSEIKGRLSFMREVGLGYLALDRAAPTLS
GGEAQRIRLAAQLGSNLQGVCYVLDEPTIGLHSRDNQILLNALASLEGNGNTLVVVEHDE
DTIRRASHIIDIGPGAGTRGGMVVAQGTAQDLMDNPASVTGRYLKHPLQHPLQPRRAITD
ETALITVQSAHLHNLHNVNAQLPVGRLSVVTGVSGSGKSTLARDVLLENLSQAVSQRKDP
AWHGCTGITGWQAIDRVLEVDQTPIGKTPRSCPATYVGFWDDVRKLFADTREARIRGWTA
ARFSFNTGEGRCPVCEGQGMRTIEMSFLPDVKVLCDGCNGERFNRDTLGVTWRGKNAGEV
LKMEVDEAVEFFAAHSRISRILQLMQDVGLGYLTLGQPSPTLSGGEAQRIKLVAELAKAR
LTEGVIKTGRASRIPHTLYVLDEPTVGLSTADVEKLIHVLHRLVDADNTVLVIEHNLDIV
AEADWILDLGPEGGNGGGRLVAQGSPEQVMGMKTVSHTGAALATFLKQAQG
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atgagctcacatatccgcattttcggcgcacgccagaacaacctcaagaaccttgatgtt
tccatcaataccggcgaactgctggtcgtgacgggtgtttcggggtcaggcaaaagttcg
ctggctttcgataccctttatgccgaaggccagcgccgctacgtagaaaccttctcgccc
tacgctcgacaatttctagaccgtatggacaagcctcaggtcgaacgtatcgaaggcata
ttgcccgccattgccatagatcaggtcaatccggtacgcaattcgcgcagcaccgtgggc
accatgacagagctgaacgaccatctgaaattgctgtttgcgcgactcggacgactatat
tgccagtgctgcggccagcacgtgcagcgagacgatgcgcaatccatacaacagcaattg
gccgcacgcgcacccgaagccggtgaccctcgcctgatcatcaccttcccgatcattgtc
ccggccaactacaccgaagaagaggtgcgcggctttctggagcaacaaggctacacgcgc
atccaccatgaagaagtccgcctgcatacgcccgctccggccaaaagcaaaggaaaaggc
aagcgcacacccaaggccgaaaaactgcgtgtactgcatgtggtgcaagaccgtttccgt
tatggctccgccgaacccgagcgcgttatggaagcgctggacaccgccctgaagcagggc
gatggccacatcgcgattcacgccctgcccgactcagacaaggaagacaatcaggaaacc
atatggcgcttcagcaaccgcctgcactgtgccgcctgcaatattgaatacagcacgcca
ctgcccagcactttttcattcaactcgcccttgggcgcctgcgaatcatgccggggcttc
gggcgtgtcatgggcatagactacggcctggtcgtacccgacgaaaagaagacactgcgc
cagggcgccatcaaaccctggcaaaccaacagctacaaagaatgccagacggaaatggag
caatatgctcccgctgcgggcatacgcctcgatacgccctggcaagacctcactgaagaa
gaaaggcgctgggtgatcgatggcacacccgactggaaaggcggcaacaacgcctggaaa
acgcagtggtatggtgcacagcgattctttgactggctggagtctcgcgcctacaaaatg
cacgtgcgcgtgctgctttcaaagtaccgcagctatacgccctgccccgcttgtggcggc
gcccggctcaaacccgacgccacactatggcgactgggcagcgtggccggaaacacagac
ggcgcttatccgcgtttcatgccggtgcacgcgcaatggagccgtgcacaactcgatgcc
ctgccagggctgggcatccacgatctgatgcgtctacccatcagtcgtgtacgcgactat
ttcctggacatcagctttggcgcccagatggacgccgctatcgacctgctgctgaatgag
gtccgcactcgcctcaaatttctgtgcgatgtgggtctgggttatttgtcgctggatcgc
cagagccgtacgctgtcgggcggagaagtccagcgcatcaacctcacgacagcgctgggg
acctcgctggtcaacacattatttgtgctcgacgaaccctccatcggcctgcacccgcgc
gacatgcaccgtgtggtggaagtcatgcaccgcctgcgcgccaacggcaacactctagtg
gtggttgaacacgatccgcaagtcatgattgccgccgaccgcatcatggatatgggtccc
ggcccgggcgagcgcggcggccaagtcgtcttcgacggtacgccagcgcaactgcgcaat
gccgacacgctgacaggaaactacctgggcagtcgcctgcgcgtcgaagcgccgcgcccc
atgcctgtggccgccaacacgccacgtctcgttcttgaaggcgccagggccaacaacctt
caaaacgtatccttgtcgataccgctggggcgcctggtctgcgtgacaggcgtatcgggt
tcgggcaagtcgaccctgatccaggatgtcctctatccggccctactcaaacaacagggc
aagcctactgaagcgccgggtgaatatgatcacctgctgggtgcggagcaactggccgac
gtcgtcatggtggaccaaacccccataggcaagacagcgcgctccaaccccgcaagctac
gtcggcgccttcgacgccatacgcaaactgttcgcccaagccccgatatccaaagagcga
ggctatacggcaggaaccttcagcttcaacaccggcgatggacgctgcccaacttgcggc
ggtaccggctttgagcatgtcgagatgcaattcctgtcggatgtatacctgcgctgcccc
gactgcgatggtaaacgcttccgtcccgaaattcgggaggtgcgggtcgaacatctgggc
cgcaacgcttcgatcgacgaagtcctggaaatgaccatcagcgaagccctggcattcttc
agcggcctgcgcgacgtccagtgggcgctggcccctctggccgacgtggggctggagtat
gtgcgcctgggccagccggtgcctacgctgtctggcggcgaggcccagcgactcaagctg
gccggccacctggctgcagcggcacgcagcggtatctcgtcggccaaagtcgccaagaaa
ggcagtctgtttttattcgatgagcccacgacaggcctgcactttgacgatgtagcccgc
ctgatgcgtgctttccgcaagctgctggcggccggccactcattgttgattatcgaacac
aacctggacgtcattcgtgcggcggactggctgatcgacctgggccccgagggcggcgac
gcgggtggccgcattgtcggcgttggcaccccccaagatcttgtattcaacaaagagtcg
catacgggccaggcgctggccgactacacaagcgccatcgtctacgaagacaaatcgcaa
caagccagacagttggccgagcctacgccacgctaccagaatgcagccggcacaccactg
caaaccgtcgtacggcgccgacacggccaggggctgagcatagacatggtcaatgcccgc
gagcacaacctgaaaggcatcaacgtcagcattccgcacgatacctttaccgtgattacg
ggcgtgtcgggttccggcaaatccaccctggccttcgacatcctgttcaatgaagggcag
cgccgctatctggaatcgcttaatgcctatgcccgagccatcgtgcagcccgcaggcaag
cccgacgtggatgccatttacggcatcccgcccaccgttgccattgaacagcgcaccagc
cgtggaggccgtaaatcgacggtcgccaccatgaccgagattcatcatttcctgcgcttg
ctgtatgtcaagctgggcacgcagatgtgccctacctgcaatgtggccgtcgaaccgcag
aaggctgaacaaatcgtcgcccaaatcctgagagactacaaaggccgacatataggcata
ctggcgccgctggtcagcgcacgcaagggctactacaccgatctggccaaatgggccgcc
ggcaaaggtcactctcatttacgagttgatggtgagttcgtaccagtgtcaccctggcca
cggctggatcggtataaagagcacactattgagttgcccgtagctgatttgatcatcaat
cccaagaatgaggcaacgctgcgtgaagctgtgcgcgaagcgctggagcatggccagggc
tccatgagcatattgctggatgtctctacaacgcaggccgacagcctggacgagcgccgc
agcgcaacgcccaacgcctccgccgaacaaaggcatttttcggtcaaacgggcctgcccc
agctgcggcacaagctttcctgaacccgatccgcgcatgttcagctacaactccaagcat
ggctggtgcaacagctgctttggcacgggcctgcaattggcgggcttcgacgccgaacaa
acgggcgaggaaaccgcctggaacgcctggtacgaaggcaatgtggaaacctgctccagc
tgtcatggcgagcgccttaacccagtctccagggcattcctatggcgcggacgctccatt
gccgagctggcagccatgcccgtatccgacgcacaaagctttttcgacggcctgatcatc
cgcgggcgcgaaggcgaaatcacccgcgacattctttctgaaatcaaggggcggctcagc
ttcatgcgggaagtcggcctgggctatctggcgctggaccgtgccgcccccaccctgtcg
ggcggcgaagcacagcgcatacggctggccgctcagttgggttccaacctgcagggcgtg
tgctacgtactggacgaacccaccataggcctgcactcgcgcgacaaccagatcttgctc
aatgccctggcatcgctcgaaggcaacggcaacacactggtggtggtcgagcacgacgaa
gacaccatacggcgggcctcgcatattatcgacataggccccggagccggtacgcgcggc
ggcatggtggtggcgcagggcacggctcaagacctgatggacaacccggcatccgtcaca
ggccgctacctgaagcaccccttgcaacaccccttgcagccgcgccgcgccatcacagac
gagaccgccctgatcaccgtccagagcgcgcacttgcataacctgcacaatgtcaatgcg
cagctgccagtcggtcgtttgagcgtggtgacaggcgtgtcgggatcgggcaaatccacg
ctggcacgcgacgtactgcttgaaaatctttcgcaagcggtatctcagcgcaaagatccg
gcatggcatggctgcacgggcattaccggctggcaggccatagaccgcgtgctggaagtt
gaccagactcccataggcaaaaccccacgctcctgtcctgccacctatgtaggcttctgg
gacgatgtacgcaagctgtttgccgatacacgcgaagccaggatacgcggctggactgcg
gcacgtttttcattcaacaccggtgaaggccgctgccccgtgtgcgaagggcaaggcatg
cgcaccatagaaatgagcttcctgcccgacgtcaaggtgttgtgtgacggctgcaatggc
gaacgcttcaaccgcgacaccctgggcgttacctggcgcggcaagaacgctggcgaagtg
ttgaagatggaagtggacgaggccgtggagttctttgctgcacattccagaatctcgcgc
attcttcaactgatgcaagacgtcggactgggctacctgacgctgggccagccctctccc
accctatcgggaggagaggcgcagcgcatcaaactggtggcggagctggccaaggcgcgc
ctgaccgagggcgtgatcaagaccggccgggcttcccggattccgcacacgctctatgtg
ctggatgagcccacagtgggcctgtctacggccgacgtcgagaaactgattcatgtgctg
catcgcctggtcgacgccgacaataccgtgctggtcatcgaacacaacctggacatcgtt
gcggaagccgactggatcctggacttgggtccggaaggaggaaacggcggcggacgcctg
gtggcgcaaggatcgcctgagcaagtgatgggcatgaaaacagtctcgcatacaggcgct
gcactggcaacattcctcaagcaggcgcaaggttga
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