Parachlamydia acanthamoebae: PUV_00910
Help
Entry
PUV_00910 CDS
T01552
Name
(GenBank) putative uncharacterized protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PUV_00910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
puv03400
]
PUV_00910
Enzymes [BR:
puv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
PUV_00910
DNA repair and recombination proteins [BR:
puv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PUV_00910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CCB85041
UniProt:
F8KUX6
LinkDB
All DBs
Position
complement(98923..102426)
Genome browser
AA seq
1167 aa
AA seq
DB search
MFDVLNRQVNIHHHHVLEASAGTGKTFSIENIIVRLLLENPPVTIQEILVVTFTRAATHD
LKVRIRENIEKALSFLQGLLLSPHYCYQEAPDYLKAIQGRDPEEIKEIKKRLEHALFEYD
QAQIFTIHSFCLRTLKTHFFEGDLALHTLTEKESLSQAEILKVIRNFFRTELKPTIYGPT
HFQLLLKQYEQSIEKLETALVKVMTQGIPLAPSPSFEEQYALFKNAMLLLKDRGFSSHSI
LTDFHTLIPLYKGLTDRQKRIKAETLSKVQLFASLFDQEEWSLQDYESVIEDQLFLVKAL
DPSALTQKALSAPPPILILPNMLSLFKRHLEPLVNPLSTFAKLAYDCQKFLKHYQQQEEK
FRFDDLLHNMLQALQDPTFTENIRNQYRAALIDEFQDTDPIQWKIFESLFLHEAYSGYLY
LVGDPKQSIYAFRQADIYTYLSAAQAIGEDYRVSLTTNYRSHPSLVQGLNVLFAQENAPD
FIHLPKWQKTLNYQHVQAADKTFDKTLTDEMGSIHFILSDQEKPSLDSLEEKVYFPFIAQ
EIQKLCHQNTFEYQDFAVLVADRYQAQRMSDYFKTLNIPSLTQRNANLADSPAVQCWQEI
LHGILHARQSSALKIALGGKIFGWNHEDILRLEDPFFYEKTLAEIYFLRKKLLSEGFIAF
YDALMHHQLFQDSHTLIEKILHQESGADFLDELCQIAELLIQKQNETHCPPEGLIAFLDE
FPILKLNDDERLYKQVDTHRKAVQILSLHSSKGLEFEIVFVLGLTKKNQAPSPLIPQSQE
GSQSILQMVYDLQDPAYIDYCQELDAEKMRQLYVAFTRAKYRLYVAALSPYEKQTAYGCA
SPIELFLAKLGQPSCTYAQLYERIHANSTESLISFIDALDNSISITYTIESQVTPPCYEM
NTTPSPILLPPPTIHISGEMLAISSFSQISKQMDQITPVWTESPPHHFDASTKNLHTLPA
GNITGLLLHEILEKFPFEKANDMQNPSEMRSWITPYVQNTEFQDWDQVLAEMLFNTLKTP
LPFKDATFALQDVQETKIFKEVEFLYPCEKGLLDLHIPEGFLKGVIDLMFEHAGKFYMID
WKSNWLGPNLQAYSTTSLQQSMHQHHYHLQSAIYVESLKRYLKLFNQFDFKANFGGIYYL
FLRGLDIEEGQLFGFYALPEGKFLCTN
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtactcaatcgacaagtcaacattcatcatcatcatgttctagaagcctcc
gctggaacaggtaaaacattttctattgaaaatattatcgtacgtcttcttttggaaaat
ccccctgttaccattcaagaaattttagttgtcacttttacacgtgccgcaacgcacgat
cttaaagtccgcattagggaaaatattgaaaaagccctatcctttttacaaggcttactg
ctttctcctcattattgctatcaagaggcaccagattatttaaaagccattcagggaagg
gatcctgaagagattaaagagataaaaaagcggctagaacatgcactttttgaatatgat
caagcacaaatttttactattcactctttctgtcttagaacactgaaaacccattttttt
gaaggcgatctggctctacacacactcacggaaaaagaatctctctcgcaggcagaaatc
ctaaaagtcattcgcaacttttttcgcacagagctcaaacccacaatctatggccccaca
cattttcaacttttacttaagcagtatgagcaatcaatagaaaagttagaaacggctttg
gttaaagtgatgacccaaggaattccactcgccccttcaccaagttttgaagaacagtat
gctttgtttaaaaatgccatgctgcttctaaaagatagaggattttcttctcactctatc
ttaaccgattttcatacgcttattcctttatataaaggcttaacggatcgacaaaaaaga
atcaaagcggaaaccctttccaaagttcaactctttgcctccctctttgatcaggaagaa
tggtcccttcaagattatgaaagtgtaatcgaagatcagctatttttagtgaaagcacta
gatccttctgccttaactcaaaaggctctttcagcacctccgcccattttaattttaccc
aatatgctttctctttttaaacggcatttagagccacttgtcaaccccttaagcacattc
gctaaactcgcgtacgattgccaaaaattcctaaaacactatcaacaacaagaagaaaaa
tttcgatttgatgatctcctgcacaacatgctgcaggcattgcaagatcctacatttaca
gaaaacattcgtaatcagtatcgagcagctttaattgatgaatttcaggatacagatccg
attcagtggaaaattttcgagtctctttttcttcacgaagcttattctggttacctgtat
ctggtaggggatcccaaacaatcgatctacgcgtttagacaagcggatatttatacgtat
ctttcagcggcacaagctattggagaagattaccgagtttctttaacaaccaactatcgc
tctcatccatcgcttgtccaaggacttaacgttctatttgcacaagagaatgctcctgat
ttcatccatttgccaaaatggcaaaaaaccttgaattatcagcacgtacaagctgcagat
aaaacctttgacaaaacattaacggatgaaatgggatccattcattttattttgagtgat
caagaaaaaccctccttggatagccttgaagaaaaagtgtactttccattcatcgcacaa
gaaattcaaaagctatgccatcaaaatacatttgaatatcaagattttgctgtacttgtt
gccgatcgttatcaagctcagagaatgtcagattattttaaaactctaaatatcccctcc
ctgacccagcgcaatgcaaatcttgcggactcccctgcagttcagtgttggcaagaaatt
ttgcacggcattctacatgcacgtcaaagcagtgctttgaagattgctttaggaggcaaa
attttcggatggaatcatgaggatattctcagactggaagatccctttttctatgagaaa
acactcgcagagatctattttttacgtaaaaaactcctttcagaaggctttatagccttt
tacgatgctttaatgcaccatcagttgtttcaagatagccatacactcatcgaaaaaata
cttcaccaagagagcggtgcggactttttggacgagctctgccaaattgctgagctgctc
attcaaaagcaaaatgaaacacattgccctcctgagggattaattgcctttttggatgaa
tttccaatcttgaaattaaacgacgatgaaagactatacaaacaagtcgatacacatcga
aaagccgtgcagattctatccttgcattcaagcaaaggattggaattcgaaattgttttt
gtgcttggattaaccaagaaaaaccaagcgccttctccactgattcctcaatcccaagaa
ggctctcaatctattttacaaatggtctatgacctgcaagatcctgcttacattgactat
tgtcaagaattagacgccgaaaaaatgcgtcagctctatgtggcttttacgagagcaaaa
tatcgtttgtatgtcgcggcattgagtccttatgaaaagcaaactgcttatggctgtgcc
tcgcctattgagctctttttagcaaaacttggacaaccttcctgcacatatgcgcagctt
tacgaaagaatccatgcaaattcaacggagtctctcatttctttcatcgatgccttggat
aattccatttcaattacttatacaattgaaagtcaagtcacacccccttgctacgaaatg
aacacgacgccctctcctattctgcttcctcctccaaccattcacatttcaggggaaatg
ctggctatctcatctttttctcaaatttcaaaacaaatggatcaaatcacacctgtttgg
accgaatctcctccccatcattttgatgcctctactaaaaaccttcatacgctgcctgcc
ggcaacataacaggactgctcttacacgaaattttagaaaaatttccatttgaaaaagct
aacgatatgcaaaatccctctgaaatgcgctcctggattacaccctacgtgcaaaacacg
gagtttcaggactgggatcaagttttggcggaaatgctttttaatacattaaaaacgcct
ttaccttttaaagatgcgactttcgctctgcaagatgttcaggaaactaaaatttttaaa
gaagtggaatttctttatccctgcgaaaaaggtctcttagatctccatattcctgaaggc
tttcttaaaggcgtaatcgatttaatgtttgagcatgcgggtaaattttatatgattgac
tggaaatccaactggctaggacctaatttgcaagcctattccacaacttccttacagcaa
tcgatgcaccaacaccattatcaccttcaaagtgccatttatgtggaatccttaaagcgc
tatcttaaactatttaatcaatttgactttaaagcgaattttggagggatttattacctg
tttcttagaggcttagatattgaagagggtcaactattcggtttttatgcattgccagaa
ggaaaattcttatgcacaaattag
DBGET
integrated database retrieval system
