Parachlamydia acanthamoebae: PUV_24250
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Entry
PUV_24250 CDS
T01552
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
puv
Parachlamydia acanthamoebae
Pathway
puv02020
Two-component system
puv02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
puv00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PUV_24250 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PUV_24250 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
puv03021
]
PUV_24250 (rpoN)
Transcription machinery [BR:
puv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PUV_24250 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_36
HTH_Crp_2
HTH_Tnp_ISL3
PEP-utilisers_N
Motif
Other DBs
NCBI-ProteinID:
CCB87375
UniProt:
F8KXL7
LinkDB
All DBs
Position
2647787..2649289
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AA seq
500 aa
AA seq
DB search
MVYPLSLQQQAKMQQSLKQTQRMIMSPQMQQAIHLLQMPLMELVDRIETELEQNPILESI
QDYPEEDQDLTRLEEDNSEADLDEEQTPEKELLFDEQDFEILKQIDEDFRDHFAESGNYY
TKRTEEEEKQKNFQLNSIQAHVSLFEHLMTIAQETFANPKDIQIAESIIGNFDERGFLQT
SLTEIAVLNDFSVKELQRVLKTIQTFDPFGVGASDLQESFLIQLRCQKKEDSLAYKIIED
CYEDLLHNRLPIIKKHLNCSIEDIQKAIDKDISKLDLHPGASFSGEIAQTIVPDAMIKEE
DGKLDIVVTSDFLPPIRLNKRYMKMLEDESLSDATRDFIRQRVISAKWLLRNIHHRNTTI
DRIAQFLAQQQHAFFQNPDGQLVPLTMKTVADNLGLHESTVARAVAGKYVETPRGLLPFR
FFFTNAYMTDEGSDISAETVREAIKDIIDKEDKSKPLSDHKISDLLEIKGIHCARRTVSK
YRAELNLGNTQQRRLFRKSC
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atggtttatcctctatcgctccaacaacaagcgaaaatgcagcaatctctcaagcaaacc
cagcgcatgatcatgtctccgcaaatgcagcaggctattcatttgctgcaaatgcctctc
atggagttagttgatcgtattgagacagaactcgaacaaaatccgattttggaatctatc
caagattaccccgaggaagatcaagatctgacccgcttggaagaggacaattctgaagct
gatcttgacgaagaacaaacccctgagaaagaattactttttgatgaacaagattttgaa
attctgaagcaaatcgatgaagattttcgggatcattttgcggaaagcggaaattattac
acaaaacgcacagaagaagaagaaaagcaaaaaaacttccaattaaattccatccaagca
catgtttcattatttgaacatttgatgactatcgctcaagaaacctttgccaatcctaaa
gacattcagatagcagaatcgatcattgggaattttgatgagcgaggatttcttcaaaca
tctttaactgaaattgctgtgttaaatgatttttcagtgaaagaacttcaacgcgtttta
aaaaccatccaaacattcgatccttttggtgtcggagcaagcgacttacaagaatctttt
ctcattcagcttcgctgtcaaaaaaaagaagatagcctagcgtataaaatcattgaagat
tgctatgaagatctcctccataatcgactacccatcataaaaaaacatttaaattgttca
atcgaagatattcagaaggctatcgataaagatatttctaaattggatttacaccccggt
gcgtctttttcaggtgagatcgctcaaacgattgttcctgatgcgatgattaaagaagaa
gatggcaagctggatatcgtggtcacctcagattttctgccacccattcgcctcaataag
cgctacatgaaaatgcttgaggacgaaagcctatctgatgctacaagagattttattcga
cagcgcgtgatttctgcgaagtggctgctacgaaatattcatcatagaaatacaaccatc
gatcggatcgcccaattcttggcccagcaacaacatgcctttttccaaaatccggatggg
caactggtccctctcaccatgaaaacggtggcagataatttaggcttgcatgaatcaaca
gtggcacgtgctgtagcggggaaatatgtggaaaccccacgcggactcctcccctttcga
ttcttttttactaatgcttacatgaccgatgaaggttccgatatttcggcagaaacagtc
cgagaggcaataaaagatatcattgacaaggaggacaaatctaaacctttgtcagatcat
aaaatctctgatctcctagagattaaaggcattcattgcgcacgacgcacagtttctaaa
tatcgcgcagagctaaacctcggaaatacccagcaaagacgcttatttcgaaaatcgtgt
taa
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