Pantoea vagans C9-1: Pvag_0534
Help
Entry
Pvag_0534 CDS
T01326
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pva03400
]
Pvag_0534 (phrB)
Enzymes [BR:
pva01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Pvag_0534 (phrB)
DNA repair and recombination proteins [BR:
pva03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Pvag_0534 (phrB)
Prokaryotic type
Pvag_0534 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
DPRP
Motif
Other DBs
NCBI-ProteinID:
ADO08739
UniProt:
E1SFV8
LinkDB
All DBs
Position
558331..559755
Genome browser
AA seq
474 aa
AA seq
DB search
MTTHLVWLRNDLRINDNLALHAACRDSKAKVIALFLATPEQWQQHDMSPRQAAFIHASLV
EVQNALAERGIALHYQACNAFSDSIDALAEFCDKHQVDQLFYNYQYEVNERQRDAEAEKR
LDDTGVICQGFDDSLLLPPGSVQSGDRSMYKVFTPFSKAFVRRLQQSLPECVPAPKPRDG
APLKTTPIPAFDCPTEAFDEDLFPAGEAAALKRLRHFATQPIIDYPAKRDLPALDATSRL
SVYLSTGVLSPRQCLHRVLHEHPDALDNSRAFTWLNELIWREFYRHLLVAYPALCRHKPF
IDWTRNVEWQREDAHFDAWKAGKTGYPIVDAAMRQMKALGWMHNRLRMITASFLVKDLLI
DWREGERYFMQQLIDGDLAANNGGWQWAASTGTDSAPYFRIFNPTTQGERFDEQGEFIRH
YLPELADVPDSHIHQPHVWAEKNNRKLDYPAPIVDHKAARKKTLDAFERAKSAA
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgaccactcatctggtctggctgcgtaatgatttacgcatcaacgataatctggcactt
cacgccgcctgtcgcgacagcaaggcaaaagtgattgcgctcttccttgctacgccggaa
cagtggcagcagcatgacatgtcacccaggcaggcggcgtttattcacgccagtctggtg
gaagtacagaacgcgctggctgagcggggcattgcgctgcactatcaggcgtgtaacgcc
ttcagcgacagtatcgatgcgctggccgaattctgtgacaagcaccaggtcgaccagctc
ttctataactatcagtatgaagtgaatgagcgtcagcgcgatgccgaggcggaaaagcgt
ctcgatgacacgggcgtgatctgccagggctttgatgacagcctgctgctgccacctggc
agtgtgcagagtggcgatcgctcaatgtataaagtctttacgccgttcagcaaagccttt
gtccgccgtttgcagcagagtcttccggagtgcgtgcctgcacctaagccgcgcgacggt
gcgccgctgaaaaccaccccaatccctgcgtttgactgtccgaccgaagcctttgatgag
gatttgtttccggcaggcgaagcggctgccctgaagcggttgcgccatttcgccactcaa
cccattatcgattatcccgcgaagcgcgaccttcctgcgctggacgctaccagtcgcctg
tcggtctatctgtcgaccggcgtgctgtcgcctcgtcagtgcctgcatcgcgtgctgcat
gaacatcccgatgcgctggacaacagtcgcgcatttacctggctgaacgagctgatctgg
cgtgagttctatcgtcatctgctggtggcctatccggcactgtgccggcacaagccattt
attgactggacgcgtaacgtggaatggcagcgtgaagacgcgcatttcgatgcctggaaa
gcggggaaaacaggctatccgatcgtcgatgctgcaatgcgtcagatgaaggcgctgggc
tggatgcacaaccgtttacggatgatcaccgccagtttcctggttaaagatctgctgatc
gactggcgcgaaggcgaacgctatttcatgcagcagctgattgatggcgacctggccgca
aacaatggtggctggcagtgggcggcttccaccggtacagattcagcaccctatttccgc
atttttaacccgaccacacagggcgagcgcttcgatgagcagggcgagtttatccgtcac
tatctgccggagctggcggacgtccctgacagccatattcaccagccccacgtctgggcg
gaaaagaacaacaggaaactcgattatccggcaccaatcgtggatcataaggcagcccgt
aaaaagacattagacgcctttgagcgcgccaaaagcgccgcctga
DBGET
integrated database retrieval system
