Pantoea vagans C9-1: Pvag_2306
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Entry
Pvag_2306 CDS
T01326
Symbol
yfhD
Name
(GenBank) Uncharacterized protein
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
pva
Pantoea vagans C9-1
Brite
KEGG Orthology (KO) [BR:
pva00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Pvag_2306 (yfhD)
Enzymes [BR:
pva01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Pvag_2306 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pva01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Pvag_2306 (yfhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Lysozyme_like
Motif
Other DBs
NCBI-ProteinID:
ADO10479
UniProt:
E1SB79
LinkDB
All DBs
Position
2461552..2463009
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AA seq
485 aa
AA seq
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MKRLKFNYLFIGLVAVLLALALWPSIPWYGGGQDRISQIKSRGVLRVSTINSPLTYYTVN
QLPAGMDYELAKRFADYLGVKLKVTVRPNLSDLFDDLDEGKADLLAAGLNYNNERLTRYQ
TGPGYYNVSQQLVYRVDKPRPKNLGDLKGRLTVASGSAYLSTLKSARSNQFPDLDWAIST
DQSPKALLEAVADGKLDYTIGDSVTIALLQRIYPQLAVAFDVTDEEPVTWYVRHSDDDSL
NAAMLDFFNGMGEEGAMARLEEKYLGHVGTFDYVDTRTFLRAIDNTLPDIKPLFEKYATS
IDWRLLAAISYQESHWNPQATSPTGVRGMMMLTRNTADSLDVGDRTDPEQSIRGGSQYLQ
DMMAKVPQTIPEDERIWFALAAYNMGYAHMLDVRKLTARQGGNPDSWADVKLRLPMLSQK
RYYTQTAYGYARGHEAYNYVENIRKYQISLVGYLQEQEKRLARQAEAQAELAKGYPAVEP
KIAMN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
ttgaaacgcctaaaatttaattatctgtttatcggtctggttgccgtgctgttagcgtta
gcgctgtggccatccattccctggtatgggggtgggcaggacaggatttcacagattaaa
tcacggggagtcctgcgggtcagtaccatcaactccccattaacgtactacacagttaac
cagttaccggccggtatggattatgagctggcaaaacgcttcgccgattatcttggcgtc
aaactgaaggtgacggttcgtcctaacctgagcgatctgtttgatgatcttgacgagggt
aaagccgatttgctggccgctggcctgaactacaacaatgaacgcctgacgcgctatcag
accgggccaggttactacaacgtttcacaacagctggtctatcgcgtggataagccacgc
cctaaaaacctcggtgacttaaaggggcggctgacagttgcgtccggatcggcctatctg
tccacgctcaagagcgcccgttccaatcagttccccgatctggactgggcgatctccacc
gatcagagtcctaaggccctgctggaagcggtcgccgacggcaagctcgactacaccatt
ggtgactcggtgaccatcgccctgctgcagcgcatctatccgcagctggcggtggcgttc
gatgttaccgatgaagagccggtgacctggtatgtgcggcacagcgatgacgacagcctg
aatgcagcaatgctcgacttctttaatggtatgggcgaagaaggcgcgatggcgcggctg
gaggagaaatacctcggtcacgtcggcacctttgactatgttgatacccgcacgttcctg
cgcgccatcgacaatacgctgcccgacatcaagccgctgtttgagaagtacgccaccagc
atcgactggcggctgctggcggcgatctcttatcaggagtcgcactggaacccgcaggct
acctcaccgaccggcgtgcgcggcatgatgatgctgacgcgtaacaccgctgatagcctg
gatgtgggcgatcgaaccgatcccgaacagagcattcgcggcggcagtcagtatctgcag
gatatgatggcgaaggtgccgcagaccatcccggaagatgagcgcatctggtttgcgctg
gcggcttataacatgggttatgcccatatgcttgacgtccgcaaactgacggcccgccag
ggcggtaatccggacagctgggcggatgtgaagctgcgtctgcccatgttaagccagaag
cgctactacactcagacagcttatggctatgcccgtgggcatgaagcctataactacgtg
gagaatatccgcaagtatcagataagcctggtgggttatctgcaggagcaggagaagcgt
ctggcgcggcaggctgaagcccaggccgaactggcgaagggctacccggcggtcgaaccg
aagatcgccatgaactaa
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