Pseudoalteromonas viridis: J5X90_16030
Help
Entry
J5X90_16030 CDS
T07232
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pvb
Pseudoalteromonas viridis
Pathway
pvb00020
Citrate cycle (TCA cycle)
pvb00640
Propanoate metabolism
pvb00660
C5-Branched dibasic acid metabolism
pvb01100
Metabolic pathways
pvb01110
Biosynthesis of secondary metabolites
pvb01120
Microbial metabolism in diverse environments
pvb01200
Carbon metabolism
Module
pvb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pvb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pvb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J5X90_16030 (sucD)
00640 Propanoate metabolism
J5X90_16030 (sucD)
00660 C5-Branched dibasic acid metabolism
J5X90_16030 (sucD)
Enzymes [BR:
pvb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
J5X90_16030 (sucD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QTL35015
LinkDB
All DBs
Position
1:complement(3644379..3645251)
Genome browser
AA seq
290 aa
AA seq
DB search
MSVLINKDTKVICQGFTGGQGTFHSEQAIQYGTQMVGGVSPGKGGTTHLGLPVFNTVREA
VESTGATASVIYVPAAFCKDAILEAIDAGIELIVCITEGIPTLDMVDVKVKLEETGVRMI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGTNFIDVLEMFQNDPKTEAIVMIGEIGGTAEEEAAEYIKNNVTKPVVSYIAGVTAP
PGKRMGHAGAIIAGGKGTADEKFAALEAAGVKTVRSLAEIGSALKEKAGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtactaattaacaaagatactaaagtaatctgtcagggtttcactggtggccag
ggtactttccactctgagcaagctatccagtacggtacgcaaatggttggtggtgtttct
cctggtaaaggcggcacaactcacctgggtctgccagtattcaacactgtacgtgaagcg
gtagagtctactggtgcaactgcatctgtaatctacgtaccagcagcattttgtaaagac
gctatccttgaagcgatcgacgcaggtatcgagcttatcgtatgtatcactgaaggcatc
cctacacttgatatggttgatgttaaagtgaagctggaagaaactggcgttcgcatgatt
ggtcctaactgtcctggtgttatcactccgggcgagtgtaagatcggtatcatgcctggt
cacatccaccttcctggtaaagtaggcatcgtatctcgttcaggtactttgacttacgaa
gcggttaagcaaactactgacgctggcttcggtcagtctacttgtgtaggtatcggtggt
gacccaatcccaggcactaacttcatcgacgtactggaaatgttccagaacgatcctaag
actgaagcaatcgtaatgattggtgagatcggtggtacagctgaagaagaagcggcagag
tacatcaagaacaacgtgactaaaccagttgtttcttacattgcaggtgttacagcgcct
ccaggtaagcgtatgggtcacgctggtgcaatcatcgcaggcggtaaaggtacagctgac
gagaagtttgctgcccttgaagctgctggcgttaagaccgttcgctcactggctgagatc
ggttctgcactaaaagaaaaagcaggctggtaa
DBGET
integrated database retrieval system
