Providencia vermicola: G3341_17695
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Entry
G3341_17695 CDS
T06449
Name
(GenBank) DEAD/DEAH family ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pvc
Providencia vermicola
Pathway
pvc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pvc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G3341_17695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvc03019
]
G3341_17695
03009 Ribosome biogenesis [BR:
pvc03009
]
G3341_17695
Enzymes [BR:
pvc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G3341_17695
Messenger RNA biogenesis [BR:
pvc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G3341_17695
Ribosome biogenesis [BR:
pvc03009
]
Prokaryotic type
rRNA helicases
G3341_17695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
DRTGG
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIC17396
UniProt:
A0A8E3VXJ7
LinkDB
All DBs
Position
complement(3910339..3912270)
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AA seq
643 aa
AA seq
DB search
MTTETDISFADLGLSASILTALNDLGYEKPSPIQKQCIPLLMDGNDVLGMAQTGSGKTAA
FSLPLLHNIDPDLKAPQILVLAPTRELAVQVAEAMSDFSKHMSRVNVVALYGGQRYDVQL
RALRQGPQVVVGTPGRLLDHLKRGTLDLSKLKGLVLDEADEMLRMGFIEDVENIMSQIPA
EHQTALFSATMPEPIRRITRRFMKEPKEIRIQASITTRPDIAQSYWTVYGMRKNEALVRF
LEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDIL
IATDVAARGLDVDRISLVVNYDIPMDAESYVHRIGRTGRAGRAGRALLFVENRERRLLRN
VERTMKLTIPEVELPDSQLLSERRQAKFAEKIQQQFESSDLDQYRALLKKLSPSEDVDME
TLAAALLKMAQGERALILPPDAPRRPRREFNDRDDRRRDRNGNGFERAERGDRGGRRERR
DVGDMEMYRIEVGRDDGVEVRHIVGAIANEADISSRYIGNIKLYGTHSTIELPKGMPTDV
LTHLSRARILNKPTQMQLIGDAQPFERRERRGGPRRDGGNEGGFGAGRRHDRDGGNRRGG
DRDNAGGNRRGGNRDRGNSNGPRGRNEDHNTASPRRRSASHNA
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccgagactgatatctctttcgctgatttaggtttatcagcgtctattttgact
gcactaaacgacctgggatatgaaaaaccttcgccaatccaaaaacaatgtatcccattg
ttgatggatggtaatgatgtgctgggtatggctcagacgggtagtggtaaaaccgctgca
ttcagtctgccactgctccataacattgaccctgatttaaaagctccgcaaattttagtc
ctagcaccaacgcgtgagttggcggtgcaggttgctgaagcgatgagcgatttttctaaa
cacatgagccgcgttaacgttgttgccctgtatggcggtcaacgttatgacgttcagttg
cgtgctctacgccaaggaccacaagtggttgttggtacaccaggtcgtctacttgaccac
ctgaagcgtggtactttagacctgtctaaactgaaaggtttagtattggatgaagctgat
gaaatgctgcgtatgggctttattgaagatgtagaaaacatcatgagccaaatcccagca
gaacatcaaacagcactgttctctgcaacgatgccagaaccgattcgtcgtattacacgt
cgtttcatgaaagagcctaaagaaattcgcattcaggctagtattacaacacgtccagat
attgctcaaagttattggactgtttacggtatgcgtaaaaatgaagcgttggttcgtttc
ttggaagcagaagactttgatgcggcaatcatctttgttcgtactaagaacgcaacgcta
gaagtggctgaagcccttgagcgtaatggctataacagtgcggcactgaatggtgatatg
aaccaagcactgcgtgagcagactctggaacgtttaaaagacggtcgtttagatattctg
atcgcaacagatgttgcggcgcgtggccttgacgttgatcgtattagtttagttgttaac
tacgacatccctatggatgcagaatcttatgttcaccgtatcggtcgtacaggtcgtgca
ggccgtgctggtcgcgcattactgttcgttgagaaccgtgaacgccgcttgctgcgtaac
gttgaacgtacgatgaaactgacgatcccagaagttgagctgccagattctcaattgctg
agtgaacgtcgtcaggcgaaatttgctgagaaaattcaacagcaatttgaaagcagcgac
ttagatcaataccgtgcactgctgaaaaaactgtcaccgtcagaagatgttgatatggaa
acattagcagcagcactactgaaaatggcacaaggtgagcgtgcgctgatcctgccacct
gatgcaccacgtcgtccacgtcgtgaattcaatgaccgtgatgaccgtcgtcgtgaccgt
aatggtaatggtttcgagcgtgcagaacgtggtgatcgcggcggtcgtcgtgaacgccgt
gatgttggtgatatggaaatgtatcgtatcgaagtgggtcgcgatgatggtgtggaagtt
cgtcacatcgttggtgcgattgctaacgaagccgatatcagcagccgttatatcggtaat
atcaagttgtacgggactcactcgacgattgaattaccaaaaggcatgccgactgacgta
ttaacgcatttaagccgtgcgcgcattctgaacaaaccaacacaaatgcaattgattggt
gatgcacaaccatttgagcgccgtgagcgtcgtggtggtccacgtcgtgatggtggcaat
gaaggtggtttcggtgcgggtcgtcgtcacgatcgtgatggtggaaaccgccgtggtggt
gatcgtgataatgcggggggtaaccgccgtggtggtaaccgtgatcgcggtaatagcaac
ggtccacgtggtcgcaatgaagaccacaataccgcctcaccgcgtcgtcgtagcgctagc
cataatgcgtaa
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