KEGG   Pandoraea vervacti: UC34_03150
Entry
UC34_03150        CDS       T03688                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pve  Pandoraea vervacti
Pathway
pve03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pve00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    UC34_03150
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pve03400]
    UC34_03150
DNA repair and recombination proteins [BR:pve03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     UC34_03150
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      UC34_03150
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 AAA_23 DnaJ_CXXCXGXG RsgA_GTPase AAA_21 nSTAND3 AAA_22 AAA_25 BCA_ABC_TP_C Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: AJP56268
UniProt: A0A0C5JMW6
LinkDB
Position
complement(676063..678927)
AA seq 954 aa
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFESMQAQGFVRFRIR
SGGGAANEGTARVYDIEALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAIALEMDTDKEHVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEELAEDTQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLRETLGYFHELVLHGAKREIADKIVKEIVARLT
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGTVIAQGSPAQIEQSAESLT
GQYLSGARRIEVPAERRAPGEDYLRIVDATGNNLKHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAASKASFTGKYLAPLLKRGK
NT seq 2865 nt   +upstreamnt  +downstreamnt
atggaaaccatccgtattcgtggggcgcgtacccacaacctcaagaacgtcaatctcgac
ttgccgcgtcaccagctcgtggtgattaccggcctgtcgggctccggcaagtcgtcgctc
gctttcgacacgctctacgcggaaggccagcgtcgctacgtcgaaagcctctcggcgtac
gcccggcagtttctccaattgatggagaagcccgacgtcgacctgatcgaagggctgtcg
ccggcgatctccatcgagcaaaaggcgacctcgcacaacccgcgctcgacggtcggcacc
gtcacggaaattcacgactacctgcgtctgctctacgcccgcgtgggcacgccctactgc
cccgatcacgggctgccgctcgaatcgcaaagcgtctcgcagatggtcgacgctgtattg
gcgcttcccgaagacaccaagctcatgatcctcgcgcccatcgtcgtcgatcgcaagggc
gagcatgcggacctcttcgagtcgatgcaggcacagggcttcgtgcgcttccggatccgc
tcgggcggcggcgcggccaacgagggcacggcgcgcgtgtacgacatcgaggcgctgccc
aaactcaagaagacggaaaagcattccatcgacgtggtcatcgaccgcgtgaaggtgcgc
gccgatctgaagcaacgtctggccgagtcgttcgagacggcgctgcgtctggccgacggc
cgggccatcgcgctggagatggataccgacaaggagcacgtcttcagttcgaagttcgcg
tgcccggtgtgctcgtattcgctgcaggagctcgagccgcgtctgttctcgttcaacaac
ccgatgggcgcgtgcccgacgtgcgacggtctgggccagatgacgttcttcgatccgaag
cgcgtcgtcgccttcccggcactctcgctcgcgtccggcgcgatcaagggctgggaccgt
cgcaatcagttctacttccagatgctgcaaagccttgccgcgttctacgacttcgacgtc
gacacgccgttcgaggaactcgcggaagacacgcagaaaatcgtgctttacggctccggc
gagcaggaaattcccttcacctacgtgaacgagaagggacgcacgtcggttcgctcgcat
gccttcgaaggcatcatcccgaatctggagcggcgctatcgcgaaaccgattcggtcgcg
gtacgcgaagagcttgcgaagtatcagaacaatcgcgcctgccccgattgcgagggcagc
cgtctgcggcgtgaggcacgattcgtcaaggtcggggaggacaagcaggcccgcgcgatc
tacgagatcggcaacctgccgctgcgcgagacactggggtacttccacgaactggtgttg
catggggccaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcgcctgacg
ttcctgaacaacgtcggcctcgactatctttcgctggagcgcagtgccgacacactctcg
ggcggcgaagcgcagcggattcgtctggcgtcgcaaatcggctcgggcctcacaggcgtg
atgtatgtgctcgatgagccctcgatcgggctgcatcagcgcgacaacgaccgcctgatc
ggcacgctcaagcatctgcgcgatctcggcaactcggtaatcgtggtcgagcacgacgag
gacatgattctcgcgagcgattacgtcgtcgacatgggcctgggcgcaggcattcacggg
gggaccgtcatcgcacaaggcagcccggcacagatcgagcaatcggccgagtcgctgacc
ggccaatatctgtcgggcgcgcgtcgtatcgaggtgccggcggaacgtcgtgcgccgggc
gaggactatctgcgtatcgtcgacgcgaccggcaacaacctcaaacacgtcaatctggac
ctgccggtcggtttgctgacttgcgtgacgggcgtgtccggttcgggcaagtcgacgctg
atcaacgacacgctgtatcacgccgtggcgcgccatctgtatggctcgtcggcggaaccg
gcaccgtatgagcagatcgacggcctggagcatttcgacaaggtcatcaacgtcgaccag
tcgcccattggacgcacaccgcgctccaacccggccacgtacacggggctgttcacaccg
attcgcgaactgttcgcgggcgtgccggcggccaaggaacgcggctacgatccgggccgg
ttctcgttcaacgtgaagggcgggcgttgcgaagcctgtcaaggcgacggcgtgatcaag
gtcgaaatgcactttctgccggacgtgtacgtgccgtgcgacgtctgccacggcaaacgc
tacaaccgcgagacgctggaagtgcagtacaaggggcgcaacatatcggaagtgctcgac
atgacggtcgagcaggcgcacgagttcttcaagcccgtgccggtcgtggcgcgcaagctc
aagacgttgctcgacgtcggcctcggctacatccgcctcggccagtcggccacgacgctc
tcgggcggcgaggcgcaacgcgtgaagctgtcgctggagctgtccaagcgcgatacgggc
cgcacgttgtatatccttgacgaaccgaccaccggattgcactttcacgacatcgaactg
ctgctcaccgtgattcaccggttgcgcgatcagggcaacacggtcgttatcatcgaacac
aatctcgacgtgatcaaaacggcggattgggtgatcgatctcgggccggaaggcggggcg
ggcggcgggcagatcatcgcccagggcacgccggagcaagtggcggcgagcaaggccagc
ttcaccggcaagtatctcgcgccgctgctcaagcgcgggaagtaa

DBGET integrated database retrieval system