Pandoraea vervacti: UC34_03150
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Entry
UC34_03150 CDS
T03688
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
pve
Pandoraea vervacti
Pathway
pve03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UC34_03150
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_03150
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UC34_03150
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
UC34_03150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
AAA_23
DnaJ_CXXCXGXG
RsgA_GTPase
AAA_21
nSTAND3
AAA_22
AAA_25
BCA_ABC_TP_C
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
AJP56268
UniProt:
A0A0C5JMW6
LinkDB
All DBs
Position
complement(676063..678927)
Genome browser
AA seq
954 aa
AA seq
DB search
METIRIRGARTHNLKNVNLDLPRHQLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLQLMEKPDVDLIEGLSPAISIEQKATSHNPRSTVGTVTEIHDYLRLLYARVGTPYC
PDHGLPLESQSVSQMVDAVLALPEDTKLMILAPIVVDRKGEHADLFESMQAQGFVRFRIR
SGGGAANEGTARVYDIEALPKLKKTEKHSIDVVIDRVKVRADLKQRLAESFETALRLADG
RAIALEMDTDKEHVFSSKFACPVCSYSLQELEPRLFSFNNPMGACPTCDGLGQMTFFDPK
RVVAFPALSLASGAIKGWDRRNQFYFQMLQSLAAFYDFDVDTPFEELAEDTQKIVLYGSG
EQEIPFTYVNEKGRTSVRSHAFEGIIPNLERRYRETDSVAVREELAKYQNNRACPDCEGS
RLRREARFVKVGEDKQARAIYEIGNLPLRETLGYFHELVLHGAKREIADKIVKEIVARLT
FLNNVGLDYLSLERSADTLSGGEAQRIRLASQIGSGLTGVMYVLDEPSIGLHQRDNDRLI
GTLKHLRDLGNSVIVVEHDEDMILASDYVVDMGLGAGIHGGTVIAQGSPAQIEQSAESLT
GQYLSGARRIEVPAERRAPGEDYLRIVDATGNNLKHVNLDLPVGLLTCVTGVSGSGKSTL
INDTLYHAVARHLYGSSAEPAPYEQIDGLEHFDKVINVDQSPIGRTPRSNPATYTGLFTP
IRELFAGVPAAKERGYDPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCHGKR
YNRETLEVQYKGRNISEVLDMTVEQAHEFFKPVPVVARKLKTLLDVGLGYIRLGQSATTL
SGGEAQRVKLSLELSKRDTGRTLYILDEPTTGLHFHDIELLLTVIHRLRDQGNTVVIIEH
NLDVIKTADWVIDLGPEGGAGGGQIIAQGTPEQVAASKASFTGKYLAPLLKRGK
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccatccgtattcgtggggcgcgtacccacaacctcaagaacgtcaatctcgac
ttgccgcgtcaccagctcgtggtgattaccggcctgtcgggctccggcaagtcgtcgctc
gctttcgacacgctctacgcggaaggccagcgtcgctacgtcgaaagcctctcggcgtac
gcccggcagtttctccaattgatggagaagcccgacgtcgacctgatcgaagggctgtcg
ccggcgatctccatcgagcaaaaggcgacctcgcacaacccgcgctcgacggtcggcacc
gtcacggaaattcacgactacctgcgtctgctctacgcccgcgtgggcacgccctactgc
cccgatcacgggctgccgctcgaatcgcaaagcgtctcgcagatggtcgacgctgtattg
gcgcttcccgaagacaccaagctcatgatcctcgcgcccatcgtcgtcgatcgcaagggc
gagcatgcggacctcttcgagtcgatgcaggcacagggcttcgtgcgcttccggatccgc
tcgggcggcggcgcggccaacgagggcacggcgcgcgtgtacgacatcgaggcgctgccc
aaactcaagaagacggaaaagcattccatcgacgtggtcatcgaccgcgtgaaggtgcgc
gccgatctgaagcaacgtctggccgagtcgttcgagacggcgctgcgtctggccgacggc
cgggccatcgcgctggagatggataccgacaaggagcacgtcttcagttcgaagttcgcg
tgcccggtgtgctcgtattcgctgcaggagctcgagccgcgtctgttctcgttcaacaac
ccgatgggcgcgtgcccgacgtgcgacggtctgggccagatgacgttcttcgatccgaag
cgcgtcgtcgccttcccggcactctcgctcgcgtccggcgcgatcaagggctgggaccgt
cgcaatcagttctacttccagatgctgcaaagccttgccgcgttctacgacttcgacgtc
gacacgccgttcgaggaactcgcggaagacacgcagaaaatcgtgctttacggctccggc
gagcaggaaattcccttcacctacgtgaacgagaagggacgcacgtcggttcgctcgcat
gccttcgaaggcatcatcccgaatctggagcggcgctatcgcgaaaccgattcggtcgcg
gtacgcgaagagcttgcgaagtatcagaacaatcgcgcctgccccgattgcgagggcagc
cgtctgcggcgtgaggcacgattcgtcaaggtcggggaggacaagcaggcccgcgcgatc
tacgagatcggcaacctgccgctgcgcgagacactggggtacttccacgaactggtgttg
catggggccaagcgcgagatcgccgacaagatcgtgaaggaaatcgtggcgcgcctgacg
ttcctgaacaacgtcggcctcgactatctttcgctggagcgcagtgccgacacactctcg
ggcggcgaagcgcagcggattcgtctggcgtcgcaaatcggctcgggcctcacaggcgtg
atgtatgtgctcgatgagccctcgatcgggctgcatcagcgcgacaacgaccgcctgatc
ggcacgctcaagcatctgcgcgatctcggcaactcggtaatcgtggtcgagcacgacgag
gacatgattctcgcgagcgattacgtcgtcgacatgggcctgggcgcaggcattcacggg
gggaccgtcatcgcacaaggcagcccggcacagatcgagcaatcggccgagtcgctgacc
ggccaatatctgtcgggcgcgcgtcgtatcgaggtgccggcggaacgtcgtgcgccgggc
gaggactatctgcgtatcgtcgacgcgaccggcaacaacctcaaacacgtcaatctggac
ctgccggtcggtttgctgacttgcgtgacgggcgtgtccggttcgggcaagtcgacgctg
atcaacgacacgctgtatcacgccgtggcgcgccatctgtatggctcgtcggcggaaccg
gcaccgtatgagcagatcgacggcctggagcatttcgacaaggtcatcaacgtcgaccag
tcgcccattggacgcacaccgcgctccaacccggccacgtacacggggctgttcacaccg
attcgcgaactgttcgcgggcgtgccggcggccaaggaacgcggctacgatccgggccgg
ttctcgttcaacgtgaagggcgggcgttgcgaagcctgtcaaggcgacggcgtgatcaag
gtcgaaatgcactttctgccggacgtgtacgtgccgtgcgacgtctgccacggcaaacgc
tacaaccgcgagacgctggaagtgcagtacaaggggcgcaacatatcggaagtgctcgac
atgacggtcgagcaggcgcacgagttcttcaagcccgtgccggtcgtggcgcgcaagctc
aagacgttgctcgacgtcggcctcggctacatccgcctcggccagtcggccacgacgctc
tcgggcggcgaggcgcaacgcgtgaagctgtcgctggagctgtccaagcgcgatacgggc
cgcacgttgtatatccttgacgaaccgaccaccggattgcactttcacgacatcgaactg
ctgctcaccgtgattcaccggttgcgcgatcagggcaacacggtcgttatcatcgaacac
aatctcgacgtgatcaaaacggcggattgggtgatcgatctcgggccggaaggcggggcg
ggcggcgggcagatcatcgcccagggcacgccggagcaagtggcggcgagcaaggccagc
ttcaccggcaagtatctcgcgccgctgctcaagcgcgggaagtaa
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