Pandoraea vervacti: UC34_18990
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Entry
UC34_18990 CDS
T03688
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pve
Pandoraea vervacti
Pathway
pve03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
UC34_18990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pve03400
]
UC34_18990
Enzymes [BR:
pve01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
UC34_18990
DNA repair and recombination proteins [BR:
pve03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
UC34_18990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJP58476
UniProt:
A0A0C5K367
LinkDB
All DBs
Position
complement(4380142..4383585)
Genome browser
AA seq
1147 aa
AA seq
DB search
MLQLFFSNRFTTLEAALLRDIAQAPGASSGPVDPFEIETIVVPSVAVRRRLELDYADVFG
VCANVRLTYLAQWLWDMAGKLVTVPESSPFAPDRLVWPLYQCLAKPWVEASPRLAGYLAG
ADDVMRFELADRLAHIYDQYLTYRPDWLERWQSGETIAPGAATSWGDVQRADEAWQSALW
RQVLAHLEIRERHPTLRAIDRIEQLTPDTIPVGWPSRVSVFALSSMPPLSMALLKAMSRL
IDVHLYVLNPCESYWFDIVPPSRLSYLTRRDGAAHREVGHPLLAEWGRQTQSHIDALYAD
LAPQAVEDRAIFQPNPAPTLLAALQNGILTLDDGRHGVPEGVDADGSVQVHVCHSLARQI
EVLHDRLLACFDEIPDLRPDDVLITVPDLGRAAPLIDAVFGTSTPRIPYLVTGLPPTRTN
PVARAFASILALPQQRVAASSLVELARTEAVAQRYDLGGNVLDAIQNWLHAAGARRGWRG
DALLRLGGPEARGDTANAADAGYDVVPALERHTLGDAMMRLFLGYALPDDAMPVDDWLPV
GGIEGGRAELLGQLARLIDDLDATTVALRTERTGLAWRDQLLAMLEQFFSDEPRFADDVA
EVRMAIEQIGAAIADGAPEVQVPVEVVARVLADALDDPTRGGVPSGRVTFAAIPSLRLLP
YRVVCMIGMDDGVLPGRVRADEFDLMRALPQRGDRQRRDDERNLFLDLMLSAQDRFLITY
TGRSVRDNAPLPPSTAVDELLDFTGQLLAPVSRGFSLDEQREARERLVVLHPLQPFSPKY
FDGKAPSLYSYDASNGEAAQQLADQLASPTPNRSAQPFVRDPLPGVAQTRLTLDDLLRFW
RHPGRAWTRDRLGLTLNDMLTEVEDEEPFVLDWAGRDALAARLLPRLLRDDERDARSARA
NAQAVERIASVSHELPGGATGAVWRRRELGGLRALATQVRQAQAEGAQEFLVTVPLVPSL
PPSWKASTDSMWHGDATLSAECLLQGRLAPVSRHGLVMYRYGSMRPSDLLAAWLAHLALC
AHLQQPEHAGLDVAARTLWYGEHETFALRPVEDAAGLLAQWVALYRLGQTRPLPFFVRSA
WKLASSGKLADAHSAWQGSAFARGDADDPYTKLIWRGVEDPLAEPFELLANTMFGPMVQH
LVLAEGA
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgctccaactattcttctccaaccggttcaccacgctcgaagctgccctgctccgtgat
atcgcgcaggcgcccggggcgtcgtcgggaccggtcgaccccttcgagatagaaaccatt
gtcgtgccaagtgtggccgtgcgtcgtcgactggaactggactatgcggatgtcttcggc
gtgtgcgcaaacgtccgtctgacctatctcgcccagtggctatgggacatggcggggaaa
ctggtgacggtgccggaaagctcgccgtttgcgccggaccggctggtctggccgctgtac
cagtgtctggcgaaaccgtgggtggaggcctcaccgcgtctggccggctacctcgcgggc
gcggacgacgtcatgcgcttcgagttggccgaccgtctcgcccatatctacgatcaatat
ctgacgtaccggccggactggctggagcgctggcagtccggcgagaccattgcgcccggg
gcggcgacaagctggggcgacgtccagcgtgccgatgaggcgtggcaaagcgcgttgtgg
cggcaggtcctcgcgcatctggagattcgtgagcgccacccgacgttgcgtgccatcgac
aggatcgagcaactgacccccgacacgatacccgtgggctggccgtctcgcgtctcggtg
tttgcgctgtcgtcgatgccgccgctttcgatggcgctgctcaaggccatgtctcgcctg
atcgacgtgcacctttatgtcctcaatccctgcgaaagttattggttcgatatcgtgccg
ccgtcgaggttgtcgtatctgacccggcgagacggcgcggcccatcgcgaagtgggccat
ccgctactggcggagtggggccgtcagacccagtcgcacatcgacgcgctatatgcagac
cttgcaccgcaggcggtcgaggaccgtgcgatatttcagccgaatcccgcaccgacgctg
ctcgccgcgttgcagaacggcattctgacgttggacgatggccgtcacggtgtaccggag
ggcgtggacgccgacggctcggtgcaagtgcacgtatgtcacagtctcgcgcgtcagatc
gaagtgctgcacgaccggttgctggcctgcttcgacgagattcccgatctgcgtcccgac
gacgtgctgattaccgtaccggatctcgggcgtgcggcgccgctcatcgacgccgtcttt
ggcacttccaccccgcgcattccctatctggtcaccggcctgccgcccacgcggaccaat
cccgttgcgcgtgcgtttgcgtcgattctggccctgccgcagcaacgtgtcgcggcatcg
agtctggtggagcttgcgcgtacggaagccgttgcgcaacgctacgacctcggcggcaac
gtactcgacgccattcagaactggttgcatgccgcgggggcgcggcgcggctggcgaggg
gacgccctgcttcgactcggtggtccggaggcgagaggagacaccgcgaacgccgcggac
gcggggtacgacgttgtgccggcgcttgagcgccacacgctgggcgacgccatgatgcgc
ctgttcctcggctatgcgctgcccgacgacgccatgcctgtggacgattggctgcctgtc
ggcggcatcgaaggcgggcgcgccgaattgctcgggcagttggcccgattgatcgacgat
ctcgacgcgacgaccgtggcgctgcgaacagagcgcaccggtctcgcatggcgtgatcag
ttgttggcgatgttggagcagtttttttcggacgaaccgcgatttgccgatgacgtcgcg
gaggtgcgcatggccatcgagcagatcggggcggccatcgcggacggcgcccccgaggtg
caggtgccggtggaagtggtggctcgggtgctggccgacgcgctcgacgatccgacgcgc
ggcggcgtgccgtccgggcgtgtgacgtttgcagcgattccgagcttgcggctgttgccg
tatcgcgtcgtctgcatgatcggcatggacgacggcgttttgccgggccgcgtacgggcc
gacgaattcgatttgatgcgcgcgctgccgcagcgcggcgaccgccagcgtcgtgacgat
gagcgcaatctttttctggatctcatgctcagtgcccaggatcgcttcctcatcacctat
acaggcagaagcgtgcgcgataacgcgccgttaccgccgtcgactgccgtggacgaactg
ctcgatttcaccggacagttgctcgcaccggtctcgcgaggtttcagtctcgacgagcaa
cgcgaggcaagagagcgtctcgtggtgctgcatcccctccaacccttctccccgaagtac
ttcgacggcaaggcgccatcgctgtatagctacgacgcttctaacggtgaggctgcccag
cagctggcggaccaactggcatcaccgacgccaaacagatcggcccagcccttcgtgcgc
gatccgctgccgggcgtcgcacaaacccgtctgacgctcgacgatttgttgcgcttctgg
cgacatccgggccgggcgtggacgcgagatcggctcggcctcacgctcaatgacatgctc
accgaggtcgaggatgaggagccattcgtgctcgattgggcaggacgcgacgcgctggcc
gcacgcctgctgcctcgcctgttgcgcgatgacgagcgcgacgcccgaagcgcccgcgcc
aacgcgcaggctgtcgagcgtatcgccagtgtgagccacgagttacccggtggggcgacg
ggggcggtgtggcggcgtcgtgaactggggggcctgcgcgccctcgccacgcaggtgagg
caggcgcaggcggagggtgcgcaggaatttcttgtcacggtgccgttggtgccgtcgctg
ccgccttcctggaaggcctccacggattcgatgtggcatggcgatgccacgctctcggcc
gagtgtctgttgcaaggccggcttgcaccggtgtcgcgccatggtctcgtgatgtaccgc
tacggcagcatgcgcccgagcgatttgctggctgcatggctcgcgcatctggcgttgtgt
gcccatctccaacagcccgagcatgccggattggacgttgccgccagaaccctctggtat
ggcgaacacgagaccttcgcgctgcgcccggtggaggacgcggcggggttgctcgcgcag
tgggtggcgctctatcggcttgggcaaacgcgcccgttgccgttcttcgtgcggagcgcc
tggaagctcgccagtagcggcaaactcgccgatgcgcacagcgcatggcaaggctcggct
ttcgcgcgcggggacgcggacgatccctataccaagttgatctggcgcggtgtggaagac
ccgctggccgagccgttcgaactgctcgcgaacaccatgttcgggccaatggtgcagcac
ctcgtactggcggagggcgcatga
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