Pandoraea vervacti: UC34_20220
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Entry
UC34_20220 CDS
T03688
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
pve
Pandoraea vervacti
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pve03021
]
UC34_20220
Transcription machinery [BR:
pve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UC34_20220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
Flot
Phage_antitermQ
IDEAL
HTH_20
HTH_24
HTH_AsnC-type
DUF134
HTH_38
HTH_31
GerE
RPA_C
Motif
Other DBs
NCBI-ProteinID:
AJP58633
UniProt:
A0A0C5JTX4
LinkDB
All DBs
Position
complement(4650197..4650796)
Genome browser
AA seq
199 aa
AA seq
DB search
MSEREIDQALVERVQKGDKAAFELLVAKYHRKIIRLVSRLVRDAAEVEDVTQEAFIKAYR
ALPQFRGESAFYTWLYRIAVNTAKNHLATQGRRAPTSTEANAEEAETFAEADQLRDINTP
ESMLMSKQIAQTVNTAMEALPDELRTAITLREIEGLSYEEIAEAMGCPIGTVRSRIFRAR
EAIASRLRPLLDTPDGKRW
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgaacgagaaatcgaccaggcgctcgtagagcgcgtgcaaaagggcgacaaagcc
gccttcgagctgttggtcgcgaaatatcaccgcaagatcatccgcctcgtatcgcggctc
gtgcgcgacgctgccgaggtcgaggatgtgacgcaggaggcctttatcaaggcctaccgc
gccttgccgcagtttcgtggcgagtcggcgttctatacctggttgtatcgtattgctgtc
aacacggcgaaaaaccaccttgcaacgcaagggcgccgtgcaccgacttcgactgaagcg
aacgctgaagaagcggaaacttttgccgaggccgatcaactaagggatatcaacacgcct
gagtcgatgctgatgagcaagcagattgctcaaacggtcaacacagcgatggaggctttg
cccgatgaacttcggacggcgatcaccctgcgagaaatcgaggggcttagctacgaagag
atcgcagaagccatggggtgcccgatcggaacggtccgttcgcgaattttccgggcgcgt
gaagcgattgccagccggctgaggccgctgctggacacgcctgacggtaagcgctggtga
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integrated database retrieval system
