Pandoraea vervacti: UC34_23225
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Entry
UC34_23225 CDS
T03688
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pve
Pandoraea vervacti
Pathway
pve02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pve00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UC34_23225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pve03021
]
UC34_23225
Transcription machinery [BR:
pve03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UC34_23225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
HTH_24
HTH_20
GerE
HTH_29
Xre-like-HTH
HTH_IclR
HTH_40
HTH_38
HTH_10
HTH_Crp_2
HTH_5
HTH_28
HTH_11
HTH_17
TnsD
Motif
Other DBs
NCBI-ProteinID:
AJP59072
UniProt:
A0A0C5KH09
LinkDB
All DBs
Position
complement(5315231..5315746)
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AA seq
171 aa
AA seq
DB search
MPADDTLQRETTLRRLYSDHHGWLHGWLHRKTGCSHRAADLAHDTFLRLLERDPPGRLAS
PRAFLTTLAQRVLYNHWRREHIERAYLEALSQQPEAFAPSPEERAIVLETLFEIDRCLDG
LPPLVKRAFLLAQLDGLTHAEIAAALGISLATVKRHLVRAGTQCFFAMETP
NT seq
516 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccgacgacacgctgcaacgcgagaccacgttgcgcagactctacagcgatcat
cacggctggcttcatggctggctgcatcgcaagactggctgctcacatcgcgcggccgac
ctcgcgcatgacactttcctgcgcctgctcgagcgcgatccgccgggcaggctcgcgtcg
ccccgcgcgtttctgacgacgctcgcccagcgtgttctctataaccactggcgacgcgaa
cacatcgagcgggcctatctcgaagccctttcccaacagcctgaagcgttcgctccctcg
ccggaggagcgcgccatcgtgctcgaaacgctgttcgagatcgatcgttgcctcgatggc
ctgccgcctctcgtcaaacgcgccttcctgctcgcgcaactcgacggccttacgcatgcc
gagatcgccgcagcgctcggcatttcgctcgcgacggtgaagcgccatctggttcgcgca
ggcacgcagtgtttcttcgcgatggagacgccgtga
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integrated database retrieval system