Panicum virgatum (switchgrass): 120687878
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Entry
120687878 CDS
T07260
Name
(RefSeq) protein HUA2-LIKE 3-like isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWWP
CID
CTK3
Motif
Other DBs
NCBI-GeneID:
120687878
NCBI-ProteinID:
XP_039825889
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All DBs
Position
9N:63213685..63227228
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AA seq
1463 aa
AA seq
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MAPAKRKRAAAAAAAAAAAAAKWKVGDLVLAKMKGFPAWPAMISEPEQWGQSSAKKKPLV
YFYGTKQIAFCNYTDLEAFTEEKKRSLLAKRHGKGADFLRAVDEIIEVYDSLKERDNNKL
ELAADEVKPVVEKLAENNSCLDTENQVNGSNTHSGKMIEDHSITTRNPDMVNSDGPSVTV
KGDEPCVVNSAPYEPTENVTILDEMRDIPLCPNAFSNKPRDAQPQNCYTRSRVPSLRKSR
SSISVESRKAQGSGKLLDCQSHTEDDKANSGAISTSDTVLLHSSIGTFNKSVALETISSK
RKLNSPVKVDSTCNSEASENGASETELKSNGTSNLPMDNSVFKRKRKADRKPLTHYKDCT
PPNKGEELQAEYSEILPDSPNSKNEVNKSDGDEHLPLVKRARVRMGRSQLEDSPIDDIDV
SNKKLEIAITADKCDTHYTPALPIKDYSADQVAAVVNTVSNPSSKFDMPFLSREGHPSWK
NKEYHPKILALDVEAALPPSKRLHRALEAMSANVAETNNSIPEVTGHSDMVLDGSLSMGN
NHSNISADAVVTVSNKPGIVQSPGPSLDTEFVHSPSGKYTSESIFQNNAVSYSASVPSKA
NNHDNHIMTKGDICEETHMDSKAVNCSLVCNELDNDVCGKTSALCMKSNEPALDATQTTS
VPDRLSSSLEKASENVVTIHVKETRAFGSAACDVDGTDKPVDHASNNVITNAICHGEIVI
AESVNNVGDTASNSSLATKSSSIQSDADTRTSEVHMFSSLALKELNHRNLKDKSTSPDSM
PMKELIAVAQARRFSRSTSFPDNFLNAKYIPETSVNTPPKEGSHSQLSPSNRIIRSTTAN
DNVHSRSPFNSIQQKKLAGHDEANVARRSFKDFLATMTRTKESIARATRLAIECAKFGIA
GEAIDIIVEHLEKESNLYKRVDLFFLVDSITQCSRNQKGGAGDVYPSLIQAVLPRILYAS
APPGNSAWENRKQCLKVLKLWLERKTLSEYVIRHHIREIETINEASFGSSHRPSRTERAL
NDPLRDNEGMLVDEYGSNAGFQLPNIICTKVLEEEDGNSSEDRSFEAVTPEQDAPDNDDN
VESQMPLEKHRHILEEVDGELEMEDVAPPSETEVTTKCLPEQSGTNCTPSDQHPSDVGPP
LPVDRPPSPPPLPSSPPPVPPPPPAPIPQSAQMQPKLQTTSDPIGPHPPRATYNIQNQQP
HSIEHPGNMNPSVAPLPPPPFNNSGYGGQSNQIPPPPPMAPLNPPGPHSNFPAPPAPYHG
NNYHRPPTTSIPNEGYHMQPPPPPPPPNQFPPVPPEHQQRPHHWGNNCPPYPERYQYNGH
DRGHPRRDRRQHGHDRQHHFDDRGYHYDDRGYHYDDRGHYFDDRRHHFDDRGHHFDDRAI
RGPMHHEAADRGRYAFPPGPPPIPDHFEGPPAPMHYGRPSDPPPGPCAGWSRPPRISNYS
PSRHSMEPPVSHAAGGHGGWRPR
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggccaagaggaagcgggcggcggcagcggccgccgcggcggccgcagccgcg
gccaagtggaaggtgggcgacctcgtgctcgccaagatgaagggcttcccggcttggccg
gccatgataagtgaaccagagcagtggggccagtcttctgctaaaaagaagccactggtc
tatttttatggtactaaacagattgctttctgcaattacactgatcttgaggcattcacg
gaagagaaaaaaaggtccctacttgctaagcgacatggtaaaggggctgattttctgaga
gcagttgatgaaataattgaagtttatgattctttaaaagagagagataataataagctt
gaattggctgctgatgaagtaaagccagttgtagaaaagcttgctgaaaataatagctgc
ttagatactgaaaatcaggtcaatggatccaatacgcatagtggtaaaatgatagaagat
cattctatcactaccaggaatcctgacatggtcaattctgatgggccttctgtcactgta
aagggtgacgagccctgtgttgtaaattctgctccttatgagcctactgaaaatgtaacc
atccttgatgaaatgagggatattcctttgtgtcctaatgcattttcaaacaaaccaagg
gatgcacagccgcagaattgctatacacgtagtagggttccatcgctgcggaagtcaaga
agttcaataagtgttgaatcaagaaaagctcaaggttctggtaaacttttggattgtcaa
agtcacacagaggatgacaaagccaactcaggtgctatttctacatcagatactgttttg
ttgcattctagtataggcaccttcaacaaatctgtagctttggagactattagcagcaag
agaaagttgaactctcctgttaaggtggatagtacctgtaacagtgaagcatctgaaaac
ggagcttcagagacagaattgaaatcaaatggtacatctaatcttccaatggacaattca
gtatttaagagaaaaagaaaagcagacagaaagcctcttacacattataaagattgtaca
ccaccaaacaaaggtgaagaattgcaggctgaatacagtgaaatccttccagattctcca
aattcgaagaatgaagtgaataagtcagatggagatgagcacttgccactggtcaaaagg
gcaagggtccgaatgggaaggtctcaattggaggattcaccaattgatgatattgatgtt
tctaataaaaagctagagatcgctataactgcagacaaatgcgatacacattatacacct
gcattacctatcaaagattattcagctgatcaggttgcggcagtggtaaatactgtttct
aatccatcatccaaatttgatatgcctttcctatcaagggagggtcatccttcttggaag
aacaaagaataccatccaaagattttggcattggatgttgaagctgctttacctccatca
aaacgtcttcatcgagccttagaagcaatgtctgctaatgttgctgaaactaacaatagt
atacctgaagttacagggcacagtgacatggttctagatggttctttgtcaatgggaaac
aaccattctaatatatctgctgatgcagtagtcactgtatctaataaacctggaatagtt
caaagccctggaccttctttggacacagagtttgtgcatagtccatctggcaaatatacc
tctgaatcaatttttcaaaataatgctgtttcttattctgcttcagttccttcaaaagca
aacaatcatgacaatcatatcatgacaaaaggcgatatatgtgaagaaacccatatggat
agcaaagctgtcaattgttccttggtttgtaatgaactggataatgatgtctgtgggaaa
acttcagccctttgtatgaaatcgaatgagcctgctcttgatgctacacaaaccacatct
gtacctgaccggttatcttcatctttggagaaagctagtgaaaatgtggtgacaatccat
gtcaaagagacaagagcctttggctcagctgcctgtgatgttgacggaactgataagcca
gttgaccatgcaagcaacaatgtgatcaccaatgctatatgccatggtgagattgttata
gcggaatccgtaaacaatgtgggtgatacggcaagcaactcttcgttggctactaaatca
tccagtatacaatccgatgcagacacccggacatctgaagtgcatatgttctcatctttg
gcattaaaagaactgaaccacagaaatctaaaggacaagagcacttccccagattcaatg
ccaatgaaagaacttatagctgttgcacaagctagaaggttctcacgatcaacttccttt
ccagataacttcttaaatgccaagtatattcctgaaacatcagtaaatacacctccgaag
gaaggatcgcacagtcagttgtcaccttcaaatcggattatcaggtccaccactgcaaat
gataatgttcattctaggagtccctttaatagcattcaacagaagaaattagcagggcat
gatgaagccaatgtggcaagaaggtctttcaaagatttccttgctacaatgacgagaaca
aaagaaagtattgcacgtgcgacacgtcttgctatcgagtgtgctaaatttggcattgct
ggtgaggcaattgacattatcgttgaacatctggagaaggaatcaaatttatataagagg
gtggacctcttctttcttgtagattcaataacacaatgctctcgcaaccagaaaggtgga
gctggagatgtatatccctctcttattcaggcagttctacctcgaatactctatgcttct
gcgccccctggaaactcagcatgggagaatcgaaagcaatgcctcaaggttttgaaactt
tggctcgaaagaaaaacactttcagagtacgtcatccgtcaccatattagggaaattgag
actatcaatgaggcgtcatttggaagttctcaccgtccttcaagaacagagagagctcta
aatgaccctttgcgtgacaatgaaggaatgcttgttgatgagtatgggagtaatgctggt
tttcagctacccaacataatctgcacaaaagtacttgaagaagaagatggaaactcctct
gaagataggagctttgaagctgttacacctgaacaggatgctccagataatgatgacaac
gtggaatctcaaatgcctttggagaagcatcgccacattctcgaagaagttgatggtgag
cttgagatggaggatgtagctccaccatctgaaactgaagttaccaccaaatgcctacca
gagcaaagtggcactaattgtacgccatctgatcaacacccttcagatgttggtcctccc
cttcctgtggataggcctccatcacctccgccattgccatcatctcctccacctgtgcca
cctccgccacctgcccccattccccagagtgcgcagatgcagccaaaattacaaacgaca
tctgatcccattgggccgcatcctccaagagctacatataatattcaaaatcaacaacca
cattctattgagcacccaggtaacatgaatccttctgttgcaccattgccgcctccacca
tttaataattcaggatatggtgggcaatcaaatcagattccacctcccccaccgatggca
ccactcaatcctcctggtccccatagcaatttccctgcacccccagcaccataccatgga
aataactatcatcggcctccaactacatcaattcctaatgagggatatcatatgcaacca
ccaccccctccgccgcctccaaatcaattccctcctgtgccaccagaacaccaacaaagg
ccacaccactggggtaataactgtcctccgtatcctgagagatatcagtacaatggacat
gatcgaggtcatcccagacgtgacagaaggcaacacgggcatgacagacaacatcatttt
gatgatagaggttaccactacgatgatagaggatatcactacgatgatagaggccattac
tttgatgatagaagacatcattttgatgatcgaggacaccattttgatgatcgagctatt
agggggccaatgcaccatgaggctgctgacaggggaagatatgcttttccgccaggacct
cctccgattccagaccactttgaaggtccaccagccccaatgcactatgggcgaccatcg
gatcctccaccagggccttgtgcaggctggtctaggccccctaggatatctaactattct
ccctccagacattctatggagcctccagtttcacatgcagctggtggacatggtggctgg
agaccacgataa
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