Penaeus vannamei (Pacific white shrimp): 113814743
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Entry
113814743 CDS
T06111
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvm03041
]
113814743
Enzymes [BR:
pvm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113814743
Spliceosome [BR:
pvm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
113814743
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
113814743
NCBI-ProteinID:
XP_027222600
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MAEIRRQGYEAPTPIQAQGWPISLQGRDFVGIAQTGSGKTLGYILPAIVHINHQPYLERG
DGPIALILAPTRELAQQILTVAQDFGSSSKIRSTCVFGGAPKGPQIRDLERGVEICIATP
GRLIDFLEAGKTNLRRCTYLVLDEADRMLDMGFEPQIRKIVEQIRPDRQTLMWSATWPKE
VRNLAEDFLKEYIQLNVGSLSLAANHNILQIVDVCQEMEKDTKLRQLLEEIMAEKESKII
VFAETKRKVDDLTRRMRREGWPAMCIHGDKSQQERDWVLSEFRSGRAPILVATDVAARGL
DVDDVKFVINYDYPSCSEDYVHRIGRTGRSDKTGTAYTFFTADNCKQAKDLIEVLKEANQ
VVNPRLYEIMEMGRGGGGKGRNRWRGRDDDRRGVLDVTAPHRSRPSGGRNGYTNGNGYAY
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatccgtcgacagggctatgaagcacctacacctattcaggcacaaggctgg
cctatttcattacaaggaagggactttgttggtattgcacagaccggctcaggaaagacc
ctgggttacattttaccagccattgttcacatcaatcaccagccatatttggaaagggga
gacggccctattgcactcattttggctcccacaagagaacttgcccaacagatccttaca
gttgcacaagacttcggttcatcttcaaagatccgctccacatgtgtgtttggtggcgca
cctaaaggaccacagattcgagacttggaacgaggggttgagatctgtattgccacacca
ggacgtctcattgatttcttagaagcaggaaaaacaaaccttcgccgttgtacatattta
gtacttgatgaggcagaccgcatgttggacatgggctttgaaccgcaaatcagaaaaatt
gtagagcagatccggcctgaccgacaaactcttatgtggtctgcaacttggcccaaagag
gtgaggaatcttgccgaagacttcctaaaagagtacattcagcttaatgtaggctcccta
tccctcgcagccaaccacaacatcctccagattgtagatgtttgtcaagagatggaaaaa
gatacaaaactccggcagctacttgaagagatcatggcagaaaaggaaagcaagatcatc
gtgtttgcagaaacaaaaagaaaagtggacgatttgaccaggcgaatgagacgcgaaggg
tggccagctatgtgtatccatggagacaaatctcaacaagaaagagactgggttttaagt
gaattccgttcagggcgggcaccaattttggttgccacagacgttgctgctcgagggtta
gatgtggatgatgtgaagttcgtgatcaactacgactacccatcttgctctgaggattac
gttcaccgaattgggcgaactggacgctcagacaagacaggaactgcatacacattcttc
acagcagacaactgtaagcaggcaaaggatctgatcgaagtgctgaaggaggccaatcaa
gttgttaatccccggttatatgaaatcatggaaatgggacgcggtggtggaggtaaaggc
cgcaatcgctggaggggacgtgatgatgacaggaggggtgttttggacgtgaccgcgccg
caccgcagccgtccgagtggcggaaggaacggctacaccaacggaaatggatatgcctac
tga
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