Penaeus vannamei (Pacific white shrimp): 113826178
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Entry
113826178 CDS
T06111
Name
(RefSeq) oligoribonuclease, mitochondrial-like
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
pvm
Penaeus vannamei (Pacific white shrimp)
Pathway
pvm03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pvm00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
113826178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvm03019
]
113826178
03009 Ribosome biogenesis [BR:
pvm03009
]
113826178
Messenger RNA biogenesis [BR:
pvm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
113826178
Ribosome biogenesis [BR:
pvm03009
]
Eukaryotic type
Pre-60S particles
RNases
113826178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-GeneID:
113826178
NCBI-ProteinID:
XP_027234853
LinkDB
All DBs
Position
Unknown
AA seq
216 aa
AA seq
DB search
MQAVSSRATLLFTPRRFQRLLISRRMSSEGQIPAKVPRLNERLVWVDLEMTGLDVTKEEI
MEAAVIVTDSDLNVVAEGPNLVLKVEDKVLDNMNDWCKQHHGDSGLTASCRKSEVTLAAA
EDQLLQFVTQHTEKGKAPLAGNSVHADKKFLDKYMPKLMKHLHYRIVDVSTVKELCRRWY
PEEFSSAPSKKVAHRALDDIKESIEELKYYKSAIFK
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcggtttcttcgagggcgaccttgctcttcactccacgccgcttccaacgcctt
ttaatctcgaggaggatgtcttctgagggccagataccagccaaggtcccgaggctgaat
gagagactggtttgggtcgatttagagatgacgggcctagatgtcacgaaggaggagatc
atggaggctgccgtgatagtgacagatagtgatctcaatgtggttgccgaagggcccaac
cttgtcctgaaggtggaagacaaggtgctcgacaacatgaatgattggtgcaagcagcat
catggtgattcaggattaaccgccagttgcaggaagagtgaagtcacacttgccgcagct
gaagaccaactgctgcaatttgtgacacagcacacagaaaagggcaaggctcccctggcg
ggtaactctgtccatgctgataagaaattcctcgacaaatacatgccaaaattaatgaaa
cacctccattatcgtattgttgatgtctctacagtaaaagagttgtgcagacgctggtac
ccagaagagttctcttcagctccttccaagaaggtggcccacagagccctagacgatatc
aaggagagcattgaagagctgaagtactacaagtcagcaatatttaaatga
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