Candidatus Planktophila versatilis: A1sIA79_06300
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Entry
A1sIA79_06300 CDS
T05250
Name
(GenBank) recombination protein RecR
KO
K06187
recombination protein RecR
Organism
pvs
Candidatus Planktophila versatilis
Pathway
pvs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1sIA79_06300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvs03400
]
A1sIA79_06300
DNA repair and recombination proteins [BR:
pvs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A1sIA79_06300
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A1sIA79_06300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toprim_4
RecR_HhH
Toprim
RecR_C
RecR_ZnF
HHH
HHH_5
DZR
Toprim_2
zinc_ribbon_2
HHH_8
Motif
Other DBs
NCBI-ProteinID:
ASY17984
UniProt:
A0A249KR86
LinkDB
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Position
complement(1219240..1219833)
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AA seq
197 aa
AA seq
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MYEGAIQDLIDALGRLPGIGPKSAQRIAFHILQADSEVAANLVEAVRTVKERVKFCTQCG
NVSEETECRICRDPRRDGTKICVVEESKDVIAIERTREFRGKYHVLGGAISPIDGIGPDQ
LRIRELMQRLSDSSITEIILATDPNLEGEATATYLARLIKPMGINVSRLASGLPVGGDLE
YADEVTLGRAFEGRTNL
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaaggcgcgattcaagacctcatcgatgcgctaggtcggctgccaggaattgga
cccaagagcgcccaacgcattgcatttcatatcttgcaagcagattctgaagtagcagct
aacttagttgaggcagttcgcacggtgaaagaacgcgttaagttctgcacgcagtgtggc
aatgtttcagaggagaccgagtgccgaatttgtcgtgacccacgacgtgatggaacaaag
atttgtgtcgttgaagagagtaaagatgtgattgcaatcgagcgcacgcgcgaattccgt
gggaaataccatgtgcttggtggcgccattagtcctattgatggaattggcccagatcaa
ctgcgcatccgggagctaatgcagcggctttctgactcatcgattaccgaaatcattttg
gccacagaccccaacctggaaggtgaagccactgccacctacctggctcgcctgattaag
ccgatgggcatcaacgtctcgcgccttgcatccggtttgcctgtgggcggagatctggaa
tatgcagatgaagtcacgcttggtcgcgcatttgagggccgcaccaacctttag
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