Phaseolus vulgaris (common bean): PHAVU_002G032800g
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Entry
PHAVU_002G032800g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHAVU_002G032800g
03410 Base excision repair
PHAVU_002G032800g
03420 Nucleotide excision repair
PHAVU_002G032800g
03430 Mismatch repair
PHAVU_002G032800g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
PHAVU_002G032800g
03036 Chromosome and associated proteins [BR:
pvu03036
]
PHAVU_002G032800g
03400 DNA repair and recombination proteins [BR:
pvu03400
]
PHAVU_002G032800g
DNA replication proteins [BR:
pvu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PHAVU_002G032800g
DNA Replication Termination Factors
ELG1-RFC complex
PHAVU_002G032800g
Chromosome and associated proteins [BR:
pvu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PHAVU_002G032800g
DNA repair and recombination proteins [BR:
pvu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PHAVU_002G032800g
Check point factors
HRAD17(Rad24)-RFC complex
PHAVU_002G032800g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
TIP49
AAA_5
DUF6166
IBV_3A
Motif
Other DBs
NCBI-GeneID:
18636808
NCBI-ProteinID:
XP_007156972
UniProt:
V7CJ73
LinkDB
All DBs
Position
2:complement(3305083..3308769)
Genome browser
AA seq
714 aa
AA seq
DB search
MDQSPPYYNRFPQTPNSTKKGRSGYEPSDTETEWQEIPRHERERRNFTLKETKALTLMNK
SPMAALHRRHPSRVEHQISSASTASVPRRRHNSKSPYKLPVAEDFAASSGLDTRRNISPL
PRPDLGRTVSPFREQRTEKPHNKRSVTAPRLRIQESSHGGISNDTVPKQRGVSPFKAPSV
GKINEMIAQVKLSKDPRSDYSSVLESTDSIQPGDLFFSRECNALQGRNSSLPKRLQQCEY
FSPRPTVNATRTPSECKGNNGDLNMNILSQSTTGVSSGSTSRKGSGTGKPSSVTSEGSGK
TSASMRKFTANRQKNQKDTWFACMRTGNCRTTTKSPERRPIDESSYIERAVVVESLPQFL
ADKHQPASLNGFICNRQEAQLLKELVSHGSCPHILLKGPSGSGKRELAMALLREIYGDAC
CNLSHDLRHFPIQDQRLKKVSVPITSSPHHMELDVNSEPNAKYALMGLIKEISNIYAIAP
EVSNINFKSDFKVMVLYEVHKAVDNIQHIIKWIVDRYSDVCKLVLCCEDDADIIEPVKNR
FKTIQVDAPQTHEVVEVLMQIAKNENFDLSMNFAAKIATKSKQNLRKAIMALEACKAHNY
PFSEEQPISVVWEEIVIEVATEILADPSFSRLLSIRGKFQMLLLDFVQPKLILQKLVEHL
LERIEANLKRELYYWHAYYDRRLPPGIAALLKLEEFVAKFMSMCRKNSGNRQYV
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcgccaccttattataaccgatttcctcagactccaaactcaacgaagaag
ggacgcagtggttatgagccatcggacactgagaccgagtggcaagagattccacgccac
gaaagagaaagaagaaacttcactttaaaagaaacaaaagcacttactctaatgaacaaa
agtcccatggcagcactacacagaaggcacccttccagggttgaacatcaaatctcatca
gcttcaacagcttcagttccacgtagaagacacaatagcaaatcaccctataaacttccc
gtggcagaagattttgctgcttcatcaggtttggatacacgcagaaatataagtcccttg
ccgagacctgaccttggaagaactgtgtcccctttcagggagcaaagaactgagaagccg
cacaacaagagatcagtgactgctcccagattgaggattcaagagagcagccatggaggg
ataagcaatgacactgttccaaagcaaagaggagtttctcctttcaaagcgccttcggtt
ggaaaaatcaacgaaatgatagcacaggtgaagctatctaaagatcccagaagtgattat
tcatcggtgcttgaaagcactgattccattcaacccggtgaccttttcttttctcgtgaa
tgcaatgccttgcaagggaggaattcttcgttgccaaaacgcctccaacagtgcgagtat
ttcagtccaaggccaacggtgaacgccacgagaaccccatctgaatgcaaaggaaataat
ggtgatcttaacatgaatatcttgtctcaatcaaccacgggtgtgagttctggttccacg
agtagaaagggcagtggcactgggaagccaagtagtgtaacaagcgaaggtagtggaaag
acaagtgcaagcatgaggaaattcacagctaacagacaaaagaaccagaaagatacatgg
tttgcttgcatgagaacaggtaactgtagaaccactacaaaatctcctgaacgtcgacct
attgacgaatcttcttacattgagagagcagtggtagtggaaagcctcccacaattcttg
gcagataagcaccaacctgcttcacttaatggcttcatttgcaacagacaagaagctcaa
cttctgaaggaattggtgtctcatggctcttgccctcatattttgctcaaaggaccctct
ggttccgggaaaagagagctagcaatggctcttcttcgagaaatatatggtgatgcatgt
tgtaatttatctcatgatctaagacacttccctattcaggatcaaaggcttaagaaagtg
tctgtccccataacatcaagtcctcatcacatggagctagatgtaaattctgaaccaaat
gctaaatatgctttaatgggattaatcaaagaaattagcaatatatatgcgattgcccct
gaagtcagcaatattaatttcaagtcagattttaaagtaatggttctttatgaggtccac
aaagcagtagataacatccagcacattatcaaatggattgtagaccgctattcggatgta
tgcaaattagtactctgctgtgaagatgatgcagacattattgaacctgtaaaaaatcgg
ttcaaaactatccaagttgatgctcctcaaactcacgaagttgttgaggttcttatgcag
atagcaaagaatgagaattttgatctgtccatgaactttgctgcgaagattgcaacaaaa
tctaagcagaacctcagaaaagcaatcatggctcttgaagcatgcaaagcacacaactat
ccattttcagaagaacaaccaatttcagttgtatgggaggagatcgtaatagaagttgcc
acagaaatcctggctgatccatcattttcacgcttactctcaattcgagggaaatttcaa
atgcttctcttagattttgtccagccgaaattgattctccagaaactcgtagaacatctc
ctagaaagaattgaagccaacttaaaaagagagttatactactggcatgcctattatgac
agaagacttccaccaggaatagcagctttactaaaattagaagaatttgtggcgaagttc
atgagcatgtgcagaaaaaactctggcaatcggcaatatgtgtag
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