KEGG   Phaseolus vulgaris (common bean): PHAVU_002G252300g
Entry
PHAVU_002G252300g CDS       T03093                                 
Name
(RefSeq) hypothetical protein
  KO
K10610  DNA damage-binding protein 1
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03420  Nucleotide excision repair
pvu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PHAVU_002G252300g
  09124 Replication and repair
   03420 Nucleotide excision repair
    PHAVU_002G252300g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pvu04121]
    PHAVU_002G252300g
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PHAVU_002G252300g
Ubiquitin system [BR:pvu04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Adoptor protein
     PHAVU_002G252300g
DNA repair and recombination proteins [BR:pvu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      PHAVU_002G252300g
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      PHAVU_002G252300g
SSDB
Motif
Pfam: MMS1_N CPSF_A
Other DBs
NCBI-GeneID: 18639069
NCBI-ProteinID: XP_007159616
UniProt: V7CQR8
LinkDB
Position
2:complement(41895127..41908488)
AA seq 1089 aa
MSIWNYVVTAHKPTNVTHSCVGNFTSPQDLNLIIAKCTRIEIHLLSPQGLQPMLDVPIYG
RIATLELFRPHGETQDYLFIATERYKFCVLQWDSETSELVTRAMGDVSDRIGRPTDNGQI
GIIDPDCRLIGLHLYDGLFKVIPFDNKGQLKEAFNIRLEELQVLDIKFLYGCSKPTIVVL
YQDNKDARHVKTYEVALKDKDFVEGPWSQNNLDNGADLLIPVPPPLCGVLIIGEETIVYC
SANAFKAIPFGPSITKAYGRVDPDGSRYLLGDHTGLLSLLVITHEKEKVTGLKTEPLGET
SIASTISYLDNAFVYIGSSYGDSQLIKLNLQPDAKGSYVEVLERYVNLGPIVDFCVVDLE
RQGQGQVVTCSGAYKDGSLRVVRNGIGINEQASVELQGIKGMWSLRSSTDDPFDTFLVVS
FISETRILAMNLEDELEETEIEGFCSQVQTLFCHDAVHNQLVQVTSNSVRLVSSTTRELR
NEWFAPSGYSVNVATANATQVLLATGGGHLVYLEIGDGILQEVKHAQLEYEISCLDINPI
GENPNHSQLAAVGMWTDISVRIFSLPDLNLVTKEQLGGEIIPRSVLLCAFEGISYLLCAL
GDGHLLNFMLNTSTGELTDRKKVSLGTQPITLRTFSSKNTTHVFAASDRPTVIYSSNKKL
LYSNVNLKEVSHMCPFNSAAFPDSLAIAKEGELTIGTIDDIQKLHIRSIPLGEHARRICH
QEHSRTFAICSLKYNPTSGEDSEMHFVRLLDDQTFEFISTYSLDTYEYGCFIISCSFSDD
NNVYYCVGTAYVLPEENEPTKGRILVFTVEDGKLQLIAEKETKGAVYCLNAFNGKLLAAI
NQKIQLYKWVLRDDGTHELQSECGHHGHILALYVQTRGDFIVVGDLMKSISLLIYKHEEG
AIEERARDYNANWMSAVEILDDDIYLGAENNFNLFTVRKNSEGATDEERGRLEVVGEYHL
GEFINRFRHGSLVMRLPDSDVGQIPTVIFGTINGVIGVIASLPHEQYVFLEKLQSNLRKV
IKGVGGLSHEQWRSFNNEKKTVEARNFLDGDLIESFLDLNRSKMDEISKAMDVSVEELCK
RVEELTRLH
NT seq 3270 nt   +upstreamnt  +downstreamnt
atgagtatatggaactacgttgtcacagctcacaaacccaccaacgtcactcactcctgc
gtcggcaatttcaccagtcctcaagacctcaacctcattatcgcgaaatgcacgcgcatc
gagattcacttgctctcgcctcagggcttgcagcctatgttggacgtgccgatatatgga
agaattgctacgcttgaactcttccgccctcatggtgaaacacaggattatctctttatc
gcaactgaaagatacaaattttgtgttcttcaatgggattctgagacttctgagcttgtt
acccgggcaatgggggatgtttctgatcggataggacgtcccactgataacggtcagatt
ggcattattgatcctgattgtaggttgattggacttcacttgtatgatggtttgttcaaa
gttattccctttgacaataaaggacagctcaaggaagcatttaatataaggcttgaggag
ctccaagttttggatatcaaatttctttatggttgttcaaagccaaccattgtggttctt
taccaggataataaagatgctcgtcatgttaaaacatatgaggttgcactgaaggataaa
gattttgttgagggtccatggtcccagaacaatcttgataatggggctgatttattgata
ccagttcccccgccactttgtggcgtgcttattattggagaagagaccatagtatactgc
agtgctaatgctttcaaggctatcccattcggaccttcaattacaaaagcctatggacga
gttgatcctgatggttctagatatttacttggtgatcatacagggttgcttagcctactt
gtaataacccatgagaaagaaaaggttactggactaaaaactgagccccttggagagact
tccattgcatctacaatatcatacctggataatgcattcgtctacattggttcaagttac
ggagattcacagcttataaaactaaatctgcagcctgatgcaaaaggttcttatgtggaa
gtactggaaaggtatgtcaatttggggcctattgttgacttctgtgtggtagaccttgag
aggcagggccaaggtcaggttgtaacttgctctggagcctacaaggatggttctcttcgc
gttgttcgtaatgggattggaattaatgaacaggcatcagtagagcttcaaggtatcaaa
ggaatgtggtcactaagatcctcaacagatgatccttttgatacttttctggttgttagt
tttatcagtgaaacaagaatcttagcaatgaatcttgaggatgagctggaagaaactgag
attgagggattctgttctcaagtgcagacattattttgccatgatgctgttcataatcaa
cttgttcaagtcacttcaaactctgtcagactggtcagttccacaactagagagctccgc
aatgaatggttcgcaccatcaggctattcagtgaatgtagctacagcaaatgctacccag
gtgttgttggccacaggaggagggcatttagtttacctggaaattggagatggaatattg
caagaagtaaaacatgcccaactggagtatgagatttcatgtctagacataaatcccatc
ggtgaaaaccccaatcacagtcagcttgcagctgttggaatgtggacagacataagtgtt
agaattttttctcttccagacctgaatctcgtcaccaaggaacagctaggaggggagatc
atacctcgttctgttcttctttgtgcctttgaagggatatcttacttgctatgtgccctc
ggtgatggacatctcttaaacttcatgctgaacacaagtactggcgagttaacagatagg
aaaaaggtatctcttgggacacaacccattacactacggacgttctcctcgaagaatact
acccatgtattcgctgcatctgatcggccaactgtgatctacagtagtaacaaaaaatta
ctttatagtaatgtaaatctgaaggaagtgagtcacatgtgtcctttcaattctgctgct
tttccagacagtttggcaattgcgaaagaaggtgagcttactattggcaccattgatgac
atacaaaaactacatattcgctctataccgcttggagagcatgctcggcgtatctgccac
caagagcactccaggacttttgctatttgtagtttgaaatacaacccaacaagtggagaa
gactctgaaatgcactttgtccgcttactggatgaccagacttttgagttcatatcaact
tactctcttgacacatatgagtatggttgctttataattagctgctcattctcagatgat
aataatgtttattactgtgttggaactgcatatgtattgccagaggaaaatgaaccaacc
aaaggaagaattcttgtttttactgttgaagatggaaaactacagctaattgctgagaag
gagacaaaaggagctgtttattgcttgaatgcatttaatggtaaattgcttgctgctatt
aatcaaaaaattcagctgtacaaatgggtgctacgtgatgatggaacccatgaattgcag
tctgaatgtggacatcatggacacatcctagctctttatgtgcaaactagaggagatttt
attgtagtcggtgatctgatgaagtcaatttccttgttaatctataagcatgaagaaggt
gctattgaggaaagagctcgtgactacaatgcaaattggatgtcggctgttgaaatcctt
gacgatgacatttaccttggtgcggaaaataattttaatctgtttactgttcggaaaaat
agtgaaggtgccactgacgaagagcgaggtcgtcttgaagtggttggtgagtatcacctt
ggagaatttattaatcggttccggcatggctccctcgtaatgcgcttgccagattctgat
gttgggcagattccaacagttatctttggcaccattaatggtgttattggggtaattgct
tctcttccgcacgagcaatatgtgttcttggagaaacttcagtcaaatttgaggaaggta
attaaaggtgttggaggactcagccatgagcaatggaggtcatttaacaatgagaagaaa
actgttgaagccagaaactttttagatggagatttgatcgaatcatttcttgatctcaac
cgcagtaagatggatgaaatttccaaggcaatggatgtttctgtagaggagttatgcaaa
agagtagaagagttgacgaggttgcactga

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