Phaseolus vulgaris (common bean): PHAVU_006G039400g
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Entry
PHAVU_006G039400g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pvu
Phaseolus vulgaris (common bean)
Pathway
pvu03030
DNA replication
pvu03410
Base excision repair
pvu03420
Nucleotide excision repair
pvu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PHAVU_006G039400g
03410 Base excision repair
PHAVU_006G039400g
03420 Nucleotide excision repair
PHAVU_006G039400g
03440 Homologous recombination
PHAVU_006G039400g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pvu03032
]
PHAVU_006G039400g
03400 DNA repair and recombination proteins [BR:
pvu03400
]
PHAVU_006G039400g
Enzymes [BR:
pvu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PHAVU_006G039400g
DNA replication proteins [BR:
pvu03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PHAVU_006G039400g
DNA repair and recombination proteins [BR:
pvu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PHAVU_006G039400g
NER (nucleotide excision repair)
GGR (global genome repair) factors
PHAVU_006G039400g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Ribosomal_L38e
Motif
Other DBs
NCBI-GeneID:
18627714
NCBI-ProteinID:
XP_007146423
UniProt:
V7BKD1
LinkDB
All DBs
Position
6:complement(14925006..14937313)
Genome browser
AA seq
1036 aa
AA seq
DB search
MGVSSQTTPLYCPSCSRHFRTALSSLSLLAPSQSPHPRRKIQSILIANNILRHSALSFRK
GYSCLKRTPFGLNKFKDVEYSYKSPVNISVKKFSHMSYGMLEERRNEEELARFPTTPAMQ
YWVEERNKLSTRKMEIQSQNKFRIASNAATSTGQKQAVSWNTKHTNVQQELDEPALPSVK
HSKLNNSKGLIDTKRVDSLLKVPPSEIHKEKVDRVKDNFYLDTTAKDEANATSVKKARSS
EQLKLRGRLCSIYEDILVVNNISLAEKVAKMLTVNYRHFIHACDTEVAKIDVKQETPVDH
GEIICFSIYSGPEADFGGGKSCIWVDVLDGGGKEIFNKFADFFQDSSIKKVWHNYSFDCH
VIQNYGFKVSGFHADTMHMARLWDSSRRWVGGYSLEGLTGDREVMCRAKLDHEKDLIGKV
SMTTIFGQKKVKVDGSEGKMTTIAPVDVLQRDERIPWICYSVLDARSTLKLYESLKSHLT
NMPWNLDGVPVLHKNMYDFYQEYLQPFGELLVKMESEGMLVDRLYLKGIEDVAKVEQEAA
VNRFRKWASRYCPDAKYMNVGSDAQLRVLLFGGTINRKNPDEAIPTERIFKIPNVDKVIA
EGKKAPTKFCDIKLNSIGYNLNVEMYTPSGWPSVSGDALKVLAGKVSAEYDFNEACDVDL
DVEDGNPSQSEVLPKEIDKSAYGTAFSCFPTEEEGREACHAIAALCEVCSIDSLISNFIL
PLQGHNISGKDDRIHCSININTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPGNSLI
VADYGQLELRILAHLANCKSMLEAFEAGGDFHSRTAMNMYPYIREAVERKEVLLEWHPQP
GEDKPPVPLLKDAFASERRKAKMLNFSIAYGKTPVGLSKDWKVSVKEARRTVDLWYNDRK
EVLKWQEERKKEACEFQRVHTLLGRARRFPKIDPDHSYHKGHIERAAINTPVQGSAADVA
MCAMLQISKNKKLKELGWKLLLQVHDEVILEGPTESAEVAKAIVVECMEKPFNGENFLKV
GLSVDAKCAKNWYAAK
NT seq
3111 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtctcttctcagaccacccctttatattgcccctcttgttcccgccacttccgt
actgctctctcttcactgtcccttttggctccctctcaatcaccacaccccagaagaaaa
atccaatcaatcctgatcgccaacaatatccttcgacacagtgccttgtctttcagaaaa
ggttattcctgcctaaagagaacaccttttgggttgaataaatttaaggacgtggagtat
agctataaatctccagtaaatatttcagttaagaaattttcacacatgtcatatggcatg
ttggaggaaaggagaaatgaagaagagttggctcgatttcccacaacccctgctatgcaa
tactgggttgaggaacggaataaattatctacacgtaaaatggaaatacagtcgcagaat
aagttcaggattgcgtcaaatgcagctacttcaactggtcagaaacaggctgtttcctgg
aatacaaagcacacaaatgtgcagcaggaacttgatgaacctgccttgccttctgttaaa
cattctaaattaaacaactcaaaagggttgatagacaccaaaagggtggacagcctgtta
aaggtacctccatcagagatccataaggagaaggttgatagagttaaagacaatttctat
ttggatacaactgcaaaggatgaagctaatgcaacatctgttaaaaaagcacgtagctct
gaacaattaaaacttcgaggcaggctttgtagtatctatgaagacatattggttgttaat
aatatttctcttgctgagaaagttgctaagatgcttacagtaaattacaggcattttatt
catgcatgtgatactgaggtggccaagatagatgtcaaacaagaaacacctgtagatcat
ggggagataatatgcttcagtatttattcaggtccagaggctgattttggaggtggaaag
tcatgtatttgggtagatgttcttgatggtggaggcaaagagatctttaataagtttgct
gatttttttcaagattcatccataaaaaaggtctggcataactatagctttgactgtcat
gttatacaaaactatggatttaaggtttctggatttcatgccgatacaatgcacatggca
cggttgtgggattcatccaggcgctgggttggtggttattctcttgaaggacttacaggt
gacagagaggtaatgtgtagggctaaactggaccatgaaaaggatttgattggtaaggtg
tccatgacaactatatttggccagaaaaaggtgaaggtagatggatctgagggtaaaatg
actaccattgctcctgttgatgtgctgcagagagatgaacgaataccttggatatgttac
tctgtcttagatgctagaagcactctaaagctttatgagagcctaaaaagtcatcttaca
aacatgccttggaatcttgatggagtacctgttttacacaaaaacatgtatgatttctac
caggaatatttgcagccatttggtgagcttctagtcaaaatggaatcagagggaatgtta
gttgatcggttatatcttaaaggcatagaagatgtggccaaagtcgagcaagaggcagct
gttaatagattccgaaaatgggcatcgagatattgtcctgatgccaagtatatgaatgtt
ggaagtgatgcacaattacgtgtactgctctttggtggcaccattaacagaaaaaaccct
gatgaggcaattccaactgagcggattttcaaaattcccaatgttgataaagtgattgca
gaaggcaagaaagctcccacaaaattttgtgatattaagttgaatagcattggatacaac
ctgaatgtagagatgtacacaccaagtggttggccgtcagttagtggtgatgctttaaaa
gtcctggctggcaaagtttctgctgaatatgacttcaatgaggcttgtgatgtggatctt
gatgttgaagatggaaatccttctcaaagtgaagttttacccaaagaaatagacaaatct
gcttacggaacagctttttcctgttttcctacagaggaagagggtagagaggcttgccat
gccattgctgctttatgtgaagtctgttcaatcgattctttgatctctaacttcatcctt
cccctgcaggggcacaacatatcaggaaaggatgatcgaattcattgttccataaatatc
aacacggagactggacgcctgtcagcaagaaggccaaatctgcagaaccaacctgctttg
gaaaaggaccgttacaaaatccgtcaagcattcatagccgctccagggaattctcttata
gttgctgattatggacagttggagcttaggattcttgcacatcttgctaactgtaagagc
atgttggaagcctttgaagctggtggagattttcattcgagaactgcaatgaatatgtac
ccatatattcgtgaagcagttgagagaaaggaagtgcttcttgagtggcatcctcagcct
ggtgaagacaaacccccagttcctctcctgaaggatgcctttgcttctgaaagaagaaaa
gccaaaatgcttaacttctcaattgcgtatggaaagactccagttgggctatcaaaggat
tggaaggtttctgtgaaagaggctaggagaacagttgacctttggtacaatgacagaaaa
gaagtgctgaaatggcaagaagaacgtaaaaaagaagcttgtgaattccaacgggttcac
acattgttagggcgagcccggaggtttccgaagatagacccagatcacagctaccataaa
ggtcatattgagcgagctgctattaatacaccagtccagggtagtgcagcagatgttgct
atgtgtgccatgttacaaatatccaaaaataagaagttgaaggagcttggatggaagtta
cttctacaggttcatgatgaggtcatattggaaggaccaacagagtcagctgaggttgca
aaggccatagttgttgagtgcatggaaaaacccttcaacggtgagaactttctcaaggtc
ggcctctctgtcgatgccaagtgtgctaaaaactggtatgctgcaaaatag
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