Phaseolus vulgaris (common bean): PHAVU_006G218900g
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Entry
PHAVU_006G218900g CDS
T03093
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pvu
Phaseolus vulgaris (common bean)
Brite
KEGG Orthology (KO) [BR:
pvu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pvu03016
]
PHAVU_006G218900g
Enzymes [BR:
pvu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
PHAVU_006G218900g
Transfer RNA biogenesis [BR:
pvu03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PHAVU_006G218900g
Prokaryotic type
PHAVU_006G218900g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
18629564
NCBI-ProteinID:
XP_007148560
UniProt:
V7BRE9
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All DBs
Position
6:31797260..31800477
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AA seq
372 aa
AA seq
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MTHSLKHSVDLECSDNNRPSKLSKIEHSTHIAHEDDEEEEEKEMTQNPRNGIQRYFLAIE
YIGTRFSGSQKQLTCRTVVGALEEAFAKFVGHPVSVSCSSRTDAGVHALSNVCHVDIQRT
SKRKPGEVLPPHEPAVVGRAVNHFLQHDSDLTVIDVRCVPSDFHARYKALERTYFYRLLS
GPEPLSTFEKDRAWHVSEELNLPAMQEACRVLVGSHDFSSFRAAGCQAKSPIRTLDELNV
SEVIESLHFPSVMDREGHDKVSSDPRSYPSNSETDIPPSSSPCIDKVTTSSEDVGFGKRR
RHRCLVVTARARSFLYHQVRLLVGVLKAVGTGNLTIPDVERILNAKSVTSASPMAPACGL
YLGEVKYDLPTT
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgacacatagtttgaagcattctgtggatttggagtgcagtgataacaataggccttcc
aagttatcaaaaatcgagcattccactcacattgcccacgaggacgacgaagaagaagaa
gaaaaagagatgactcaaaaccctagaaatggcattcaacgctatttccttgcaatcgag
tacatcggcactcgcttctccggttctcagaagcagctcacttgccgcaccgtcgtcggt
gctctcgaggaagcttttgctaaatttgttggccaccccgtctctgtctcttgttcaagt
cgaactgatgctggagttcatgccttgtcaaatgtttgtcatgtggatattcaacggacc
agcaaaaggaagcctggtgaagtgttaccacctcatgaacctgctgtggttggaagggct
gtgaaccatttcttacagcatgacagtgacttgacggttatcgatgtacgatgtgttcca
tctgattttcatgccagatataaagcactagagcggacatacttctatcgtttgctgtct
gggccagagccgttgtcaaccttcgagaaagatcgagcatggcacgtatctgaggagctt
aatcttccagctatgcaagaagcgtgcagggttcttgttggaagccatgattttagttcc
ttcagggcagctggttgtcaggcaaaatcaccaattagaactttggatgaactcaatgtc
agcgaggtaattgaaagtctacattttccatctgtaatggacagagaaggacatgataaa
gtgagtagtgatcctcgtagctaccctagcaactctgaaactgacattcctcctagttca
agtccatgcattgataaagtaacgacttcaagtgaagatgtaggatttggcaaaagaaga
cgacatcgttgcctggtggtaacagcacgagcacgttcctttctttatcatcaggttaga
ttacttgtgggtgttctcaaggctgttggcactggaaacttgacaattcctgacgttgaa
agaattttgaatgccaagagtgttacttccgcaagccccatggcccctgcatgtggtctt
tacctgggagaggtgaaatatgatcttcctacaacttag
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