KEGG   Phaseolus vulgaris (common bean): PhvuCp56
Entry
PhvuCp56          CDS       T03093                                 
Symbol
rpoA
Name
(RefSeq) RNA polymerase alpha subunit
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pvu  Phaseolus vulgaris (common bean)
Pathway
pvu03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pvu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    PhvuCp56 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pvu03021]
    PhvuCp56 (rpoA)
   03400 DNA repair and recombination proteins [BR:pvu03400]
    PhvuCp56 (rpoA)
Enzymes [BR:pvu01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     PhvuCp56 (rpoA)
Transcription machinery [BR:pvu03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     PhvuCp56 (rpoA)
DNA repair and recombination proteins [BR:pvu03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      PhvuCp56 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_L RNA_pol_A_CTD RNA_pol_L_2
Other DBs
NCBI-GeneID: 4961805
NCBI-ProteinID: YP_001122838
UniProt: A4GGD7
LinkDB
Position
CP
AA seq 333 aa
MVQEKLRVSTRTLQWKCVESRIDSKRLYYGRFILSPLMKGQADTIGIAIRRILLGEIEGT
CITCVKSEKIPHEYSTIIGIEESVHEIFMNLKEIVLKSNMYGIQDASISFKGPGYITAQD
IILPPSVEIVDNRQHIANVTEPVHLCIELKIERNRGYRIKTLKNFQDGSYDIDARFMPVR
NVNYSIHSYVNGNEKQEILFLEIWTNGSLTPKEALYEASQNLIELFIPFLHAEEDNFHLE
KNQHKVTLPLFTFHDILVKDKLRKNQKEIALKSIFIDQLELPPRIYNCLKRSNIHTLLEL
LSNSQEDLLKFEHFHVEDGKSILDILKIQKYFA
NT seq 1002 nt   +upstreamnt  +downstreamnt
atggttcaagagaaattaagagtctctactcggacactacaatggaaatgtgttgaatca
agaatagacagtaagcgtctttattatggacgctttattctgtccccacttatgaaaggt
caagccgatacaataggcattgcaatccgaagaattttactcggagaaatagagggaaca
tgtatcacatgtgtaaaatcagagaaaataccacatgaatattctaccataataggtatt
gaagaatcagtacatgaaattttcatgaatttgaaagaaattgtattgaaaagtaatatg
tatggaatacaagacgcatcgatttctttcaaaggtcctggatatataaccgctcaagac
atcattttaccaccttcggtggaaatcgttgataatagacaacatatagccaacgtaaca
gaacctgttcatttgtgtattgaattaaaaattgagaggaatcgggggtatcgtataaaa
acactaaaaaactttcaagacggaagttatgatatagatgctagattcatgcctgttcga
aatgtaaattatagtattcattcttatgtcaatgggaatgaaaaacaagagatacttttt
ctcgagatatggacaaatggaagtttaactcctaaggaagccctttatgaagcctcccaa
aatttgattgagttatttattccctttttacacgcagaagaagataactttcatttagaa
aaaaatcaacacaaagttactttgcccctttttacttttcatgatatattggttaaggat
aaactaaggaaaaatcaaaaagaaatagcattgaaatctatttttatagaccaattagaa
ttacctcccaggatctataattgtctaaaaagatccaatattcacacattattagaactt
ttgagtaacagtcaagaagaccttctgaaatttgaacattttcacgtagaagatggaaaa
tctatattggacattttaaaaatacaaaaatattttgcatga

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