Pectobacterium parmentieri WPP163: Pecwa_0183
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Entry
Pecwa_0183 CDS
T01106
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pwa
Pectobacterium parmentieri WPP163
Pathway
pwa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Pecwa_0183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwa03400
]
Pecwa_0183
Enzymes [BR:
pwa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pecwa_0183
DNA repair and recombination proteins [BR:
pwa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Pecwa_0183
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA-like_WH
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
AAA_30
TrwB_AAD_bind
AAA_22
AAA_19
zinc-ribbons_6
zinc_ribbon_15
Motif
Other DBs
NCBI-ProteinID:
ACX86038
LinkDB
All DBs
Position
complement(196014..198212)
Genome browser
AA seq
732 aa
AA seq
DB search
MSVAQVALPVPLARTFDYLLPTGGMTPQVGTRVSVSFGNRKAIGIITALSDTSALPLEQL
KPVHDVLDEQPLFPPSLWRILLWAVEYYHYPIGEVLFHALPILLRQGKPAHRAPLWQWFA
TEQGRATPLSTLKRAAKQQQALAALLQSPVYRHQVSEIGLTETALQALRSKGLCELTAAE
QTPHDWRQSFSMATERLRLNTEQATAVGAIRSEDNHFAAWLLAGITGSGKTEVYLSVLEN
VLAQGKQALVLVPEIGLTPQTIARFRERFNAPVDVLHSALNDSERLAVWLRARSGEAAIV
IGTRSALFTPFARLGLIVIDEEHDSSYKQQEGWRYHARDLAVFRAREEDIPIVMGTATPA
LETLHNVQNGKYRRLNLTKRAGNAALAKQHVIDLKSLPLTAGLSQPLITRIRHHLTNDNQ
VILFLNRRGFAPVVMCHECGWIAECQRCDHYYTYHQHQKMLRCHHCDSQRPVPQQCPGCG
STNMVPVGLGTEQLEQSLAPIFPDVPITRIDRDTTSRKGALEQQLSQVRQGGARLLIGTQ
MLAKGHHFPDVTLVALLDVDGSLFSADFRAAERFAQLYTQVAGRAGRAGKAGEVALQTHH
PDHPLLQTLLHQGYDAFASQALTERKSVFLPPFTSHILFRADDHDNQQAALFLQQLRNLL
EASPLRDESLWLLGPVPALQPKRAGRFRWQLLLQHPSRALLQKLVRTSLALIGTLPQARK
VKWVLDVDPTDG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtcgctcaggtcgctttgcccgtgccgctggcacgtacattcgattatttgcta
cccacaggaggaatgactccacaagtcggcacacgcgtcagcgtctcttttggcaaccgt
aaagctatcggtatcattaccgcactgagcgacaccagtgcacttccacttgaacaatta
aaacccgtgcatgacgtgctggacgaacagccgctgtttccccccagcctgtggcgtatt
ttgctgtgggccgtcgagtactatcactacccgattggcgaagtgctgttccatgcgttg
ccgatcttgctacgtcaggggaaacccgcacaccgcgcaccgctctggcagtggtttgcc
accgaacaaggccgggcgacaccgctcagcacgctcaaacgcgccgctaagcagcagcag
gcgctggcggctttacttcagtcgccagtttatcgccatcaggtgagcgaaatcgggttg
acagagacagcgttacaggcgctgcgtagcaaagggttgtgcgagttaacagccgcagag
caaacccctcacgactggcgtcaaagctttagcatggccaccgagcgcctgcgcctgaat
acggaacaggccaccgccgtcggcgctatccgcagcgaagataaccactttgccgcctgg
ttgctcgcgggcatcactggctcaggtaaaaccgaagtctatctcagcgtgttggaaaac
gtgcttgcacagggtaaacaggcgctggtattagtgcctgaaattggcctgacaccacag
accatcgcccgcttccgcgaacgttttaacgccccggtggatgtgctgcactcggcactc
aacgacagtgaacgccttgctgtttggctgcgcgcccgcagtggcgaagcggcgatcgtc
atcgggacgcgctcggcactatttaccccctttgcacgtttggggctgattgtgatcgat
gaagaacacgacagctcctataaacagcaagaaggttggcgctatcacgcccgtgatttg
gccgtcttccgcgccagagaggaagatattccgatcgtgatgggaacggcgacgcccgcc
ctggaaacactccataacgtccaaaacggcaagtaccgtcgattaaacctgaccaaaaga
gcgggcaacgccgcactggccaaacagcacgttatcgatctgaaaagcctgccgctgaca
gcaggattatcccagccgctgattacccgtatccgtcaccatctaacgaacgataatcag
gttattttgttcctcaatcggcgcggattcgcccccgtggtaatgtgccatgagtgcggc
tggattgccgaatgtcagcgctgcgatcactattatacctaccaccagcatcaaaagatg
ttgcgctgccaccactgcgacagccagcgtccggtaccacaacagtgccccggctgcgga
tcgaccaatatggtgcccgtcggtctgggcaccgagcagttggagcaaagccttgccccg
atctttccagatgttccgatcacccgcatcgaccgtgataccaccagccgtaaaggcgcg
cttgagcagcagctctcacaggtcaggcagggaggtgcgcgtcttcttatcggtacacaa
atgttggcgaaagggcaccatttccctgacgtaacgctggtggccttgctggacgtcgac
gggtcactgttctccgccgacttccgcgcagccgaacgtttcgcccagctctacactcag
gtggcgggtcgcgcagggcgtgcaggcaaggctggcgaggtggcgctgcaaactcaccac
ccagaccatccactattgcaaacgctgctgcatcagggctacgacgcctttgccagtcag
gcacttaccgaacgaaaaagtgtttttctgccgccgtttaccagccatatcctcttccgt
gctgacgatcacgataatcagcaggccgccttattcctccagcaattgcgcaatttactg
gaagccagtcccctacgggatgaatcactctggctgctgggcccggtgcctgctttacag
ccaaaacgtgcagggcgcttccgctggcagctcctgctacagcacccttccagagcattg
ctacagaaactggtcagaacatcgttggcgctaatcggcacactaccgcaggcacgtaag
gtgaaatgggtgctggatgttgaccccacggacggttag
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