Pectobacterium parmentieri WPP163: Pecwa_1182
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Entry
Pecwa_1182 CDS
T01106
Name
(GenBank) transcriptional regulator, CdaR
KO
K02647
carbohydrate diacid regulator
Organism
pwa
Pectobacterium parmentieri WPP163
Brite
KEGG Orthology (KO) [BR:
pwa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwa03000
]
Pecwa_1182
Transcription factors [BR:
pwa03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pecwa_1182
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Diacid_rec
HTH_30
GGDEF_2
GAF
GAF_2
CodY
sCache_like
Motif
Other DBs
NCBI-ProteinID:
ACX86996
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Position
1277776..1278933
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AA seq
385 aa
AA seq
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MASYHLNAKMAQDIVARTMQIIDSNINVMDARGKIIGSGDQERLGELHEGALLALSQGRV
VDIDDAVARHLHGVRPGINLPLRIDGEIVGVIGLTGNPSQLRQYGELVCMTAEMMLEQAR
LLHMLAQDSRLREELVLNLVRTDDLSPALMEWAQRLGIDLNKPRVAAVIEVDSGQLGVDS
AMAELQQLQTLLTTPERDNLIAIVSLTEMVVLKPALNSHGRWDAEEHRRRVDTLMSRMAE
SSRLRVRLALGNYFSGPGSIARSYRTARTTMSVGKQRMPAQRCYYYQDLMLPVLLDSLRG
GWQANELVRPLSKLKAMDGNGLLRRTLGAWFRNNVQPGATAKALFIHRNTLEYRLNRISE
LTGLDLGNFDDRLLLYVALQLDEEE
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgtatcatctcaatgccaagatggcacaggatattgtcgcgcgaaccatgcag
atcattgatagtaatatcaacgtgatggatgctcgcggtaaaattatcggcagtggcgat
caggaacgattgggggaattgcacgaaggggcgctgttggcgctctcgcaggggcgggtt
gtcgatattgatgatgctgtggcgcgccacctgcacggcgtgcgtccgggtatcaattta
cctttgcgtattgatggcgagattgttggcgttatcggcctgacagggaatcccagccaa
ctgcgacaatacggcgaacttgtctgtatgacagcggaaatgatgctggagcaggcgagg
ctgttgcatatgctggcacaggacagtcgtctgcgcgaagaactggtgttgaacctggtt
cgtaccgacgatttgtctcctgcgctcatggagtgggcgcagcgtttaggcatcgatctg
aataagccccgtgtggccgcagtgatcgaagtggacagcgggcagcttggcgtagactcc
gctatggcagaactacagcagttgcagacgctgctgactacgccggagcgtgacaacctg
atcgcgattgtctctctaacggaaatggtggtactaaaaccggcgctgaacagccacggg
cgttgggatgcagaagagcatcgacgtcgcgtggatacgctgatgtcgcgcatggcagaa
agtagccgactgcgggtgcgactggcgttggggaactatttttctggccccggcagtatc
gcgcggtcttatcgcacggcgcgaacgacaatgagcgtaggcaaacagcgtatgcccgct
caacgttgttattactatcaggatttgatgttgcccgtgctgctggatagtctgcgcggt
ggttggcaggcaaacgaactggtacgcccgctttctaagctcaaggcgatggacggtaat
ggtctgctgcgccggacgctgggtgcctggttccgtaataacgttcaacccggtgcgacg
gcgaaagcgctgtttatccaccgtaatacgctggagtatcgtcttaatcgtatctctgaa
ctgacgggattggatctggggaatttcgacgaccgcctgctgctgtacgtcgctttacaa
ctggatgaagaagagtag
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