KEGG   Pectobacterium wasabiae: A7983_09540
Entry
A7983_09540       CDS       T04535                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
pws  Pectobacterium wasabiae
Pathway
pws02020  Two-component system
pws02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:pws00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    A7983_09540
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    A7983_09540
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pws03021]
    A7983_09540
Transcription machinery [BR:pws03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A7983_09540
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: AOR63495
UniProt: A0A1D7Z134
LinkDB
Position
complement(2107850..2109283)
AA seq 477 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDQHDEIESFE
KADSDSLDTGEALEQRDMPEELPLDATWDEIYSAGTPSGTGSDYRDEELPIYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVPLEDILDSIGDDDVTLEEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQFDNRTPRLLEARLIVSDHLDLLANHDFRSLIRVTR
LKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKVQGVWVVELNTDSVPRLQIN
QQYAALGNSARNDSDGQFIRSNLQEARWLIKSLESRNDTLLKVTRCIVEQQQDFFEQGEE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactcaggcttagccagcaactggccatgactccacagctccaa
caggcaattcggctgttgcagttgtccacgcttgaattgcaacaggagattcaactggcg
ctggaaagcaatccgttgctcgaacaaacggatcagcacgacgaaatcgagtcattcgaa
aaggcagacagcgattcactggataccggtgaagcccttgaacaacgggacatgccggaa
gaattgccgctcgacgccacctgggatgagatttattccgcaggcacaccgtcgggcacg
ggttctgactatcgcgacgaagaactgcctatttatcaaggcgaaaccacgcaaacgctt
caggattacctgatgtggcaggttgagctgacgccgttttcggatactgatgcggccatc
gcaacgtcgattgtggatgcggtggacaacactggctacctgaccgtgccgctggaagac
attcttgacagcatcggtgacgacgacgtgacgctggaagaggtcgaagccgtacttaaa
cgcgtgcagcgctttgatcctgttggcgtcgctgctcgcgatctacgcgattgcctgctg
gtacaactttcccagtttgacaaccgtacgccgcgcttgctcgaagctcgcctgatcgtc
agcgatcatcttgatctgttagctaaccacgatttccgtagcctgatccgcgtgacccgc
ctgaaagaggaagtgctgaaagaagcgttggcgctgatccaatcgctcgacccacgtccg
gggcagtcaattaacacgggtgaatccgaatatgtgatccctgatgtgctggtgcgcaag
gtgcagggagtgtgggtcgttgaattgaacaccgacagcgttccccgtttgcagattaac
caacaatatgcagcgctgggtaacagcgcgcgcaacgacagcgacgggcaattcatccgc
agtaacctgcaagaggcacgctggctcatcaaaagtctggagagtcgcaacgatacgctg
ctaaaagtaacccgctgcatcgtcgagcagcagcaggatttcttcgagcagggtgaagaa
ttcatgaagcccatggtattggcagacatcgcccaagcggtagatatgcatgaatccacc
atctcacgcgtgacgacacagaaattcctacacagcccacgcggcatttttgagctaaaa
tatttcttctccagccacgttaataccgatagcggcggagaagcttcgtcaacggctatc
cgtgcactggtgaaaaagcttatcgcagcggaaaaccctgcgaagccattaagcgacagc
aagctcaccacactgctctccgagcagggcatcatcgtggcgcgccgtaccgtcgcaaaa
taccgagagtctttatctatcccaccatcaaatcagcgtaaacaactggtttga

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