Pectobacterium wasabiae: A7983_09540
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Entry
A7983_09540 CDS
T04535
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
pws
Pectobacterium wasabiae
Pathway
pws02020
Two-component system
pws02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A7983_09540
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A7983_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pws03021
]
A7983_09540
Transcription machinery [BR:
pws03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A7983_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
AOR63495
UniProt:
A0A1D7Z134
LinkDB
All DBs
Position
complement(2107850..2109283)
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AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQEIQLALESNPLLEQTDQHDEIESFE
KADSDSLDTGEALEQRDMPEELPLDATWDEIYSAGTPSGTGSDYRDEELPIYQGETTQTL
QDYLMWQVELTPFSDTDAAIATSIVDAVDNTGYLTVPLEDILDSIGDDDVTLEEVEAVLK
RVQRFDPVGVAARDLRDCLLVQLSQFDNRTPRLLEARLIVSDHLDLLANHDFRSLIRVTR
LKEEVLKEALALIQSLDPRPGQSINTGESEYVIPDVLVRKVQGVWVVELNTDSVPRLQIN
QQYAALGNSARNDSDGQFIRSNLQEARWLIKSLESRNDTLLKVTRCIVEQQQDFFEQGEE
FMKPMVLADIAQAVDMHESTISRVTTQKFLHSPRGIFELKYFFSSHVNTDSGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTTLLSEQGIIVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccagcaactggccatgactccacagctccaa
caggcaattcggctgttgcagttgtccacgcttgaattgcaacaggagattcaactggcg
ctggaaagcaatccgttgctcgaacaaacggatcagcacgacgaaatcgagtcattcgaa
aaggcagacagcgattcactggataccggtgaagcccttgaacaacgggacatgccggaa
gaattgccgctcgacgccacctgggatgagatttattccgcaggcacaccgtcgggcacg
ggttctgactatcgcgacgaagaactgcctatttatcaaggcgaaaccacgcaaacgctt
caggattacctgatgtggcaggttgagctgacgccgttttcggatactgatgcggccatc
gcaacgtcgattgtggatgcggtggacaacactggctacctgaccgtgccgctggaagac
attcttgacagcatcggtgacgacgacgtgacgctggaagaggtcgaagccgtacttaaa
cgcgtgcagcgctttgatcctgttggcgtcgctgctcgcgatctacgcgattgcctgctg
gtacaactttcccagtttgacaaccgtacgccgcgcttgctcgaagctcgcctgatcgtc
agcgatcatcttgatctgttagctaaccacgatttccgtagcctgatccgcgtgacccgc
ctgaaagaggaagtgctgaaagaagcgttggcgctgatccaatcgctcgacccacgtccg
gggcagtcaattaacacgggtgaatccgaatatgtgatccctgatgtgctggtgcgcaag
gtgcagggagtgtgggtcgttgaattgaacaccgacagcgttccccgtttgcagattaac
caacaatatgcagcgctgggtaacagcgcgcgcaacgacagcgacgggcaattcatccgc
agtaacctgcaagaggcacgctggctcatcaaaagtctggagagtcgcaacgatacgctg
ctaaaagtaacccgctgcatcgtcgagcagcagcaggatttcttcgagcagggtgaagaa
ttcatgaagcccatggtattggcagacatcgcccaagcggtagatatgcatgaatccacc
atctcacgcgtgacgacacagaaattcctacacagcccacgcggcatttttgagctaaaa
tatttcttctccagccacgttaataccgatagcggcggagaagcttcgtcaacggctatc
cgtgcactggtgaaaaagcttatcgcagcggaaaaccctgcgaagccattaagcgacagc
aagctcaccacactgctctccgagcagggcatcatcgtggcgcgccgtaccgtcgcaaaa
taccgagagtctttatctatcccaccatcaaatcagcgtaaacaactggtttga
DBGET
integrated database retrieval system