Pectobacterium wasabiae: A7983_20300
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Entry
A7983_20300 CDS
T04535
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent helicase HrpA [EC:
3.6.4.13
]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A7983_20300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
T2SSE
AAA_19
HA2_N
nSTAND3
NACHT
PhoH
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AOR65557
UniProt:
A0A1D7Z750
LinkDB
All DBs
Position
complement(4467833..4471720)
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AA seq
1295 aa
AA seq
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MKSPLSALSTQLSELMLRDRQRLRRRLQGAAKISSPQAQAAIAQEIEGEIVAARQKVENR
RANCPTIHYPEQLPVSQKKDEILEALRHHQVIIVAGETGSGKTTQLPKICLELGRGVHGL
IGHTQPRRLAARTVADRIAAELETPLGGSVGYKVRFNDQVGDNTLVKLMTDGILLAEIQQ
DRLLMQYDTLIIDEAHERSLNIDFIMGYLRQLLPKRPDLKVIITSATIDPQRFSRHFNNA
PIIEVSGRTYPVDVRYRPVVEDADDSERDQLQAIFDAVDELTREGPGDILVFMSGEREIR
DTAEALTRLDLPHTEILPLYARLSNQEQNRVFQSHHGRRIVLATNVAETSLTVPGIRYVI
DPGTARISRYSFRTKVQRLPIEPVSQASANQRKGRCGRVAAGVCIRLYSEQDFLSRPEFT
DPEILRTNLASVILQMTSLGLGDIAAFPFVEAPDKRNIQDGVRLLEELGAIHLAENGHYH
LTPQGQQLAQLPIDPRLARMVLEARKMGCVREVMVITAALSIQDPRERPMDKKQASDEKH
RRFADKDSDFLAFVNLWDYLREQQKALSSSQFRRQCRTDFLNYLRVREWQDIYTQLRQVV
KELGLPVNSEPADYLSIHCSLLTGLLSHIGQKDIEKQEFSGARNARFAIFPGSGLFKKPP
KWTMVAELVETSRLWGRIAARIEPEWIEPLAPHLIKRSYSDPHWEKAQGTVMAQEKVTLF
GLPIVAARKVNYSPIDPTLAREMFIRHALVEGDWQTHHAFFRANLKLLAEVEDLEHKSRR
RDILVDDETLFAFYDRRLPHDVVSSRHFDKWWKGASRDNADLLNFEKSMLIKDGAEKVSA
LDYPNFWHQDNLKLRLSYQFEPGTDADGVTVHIPLPILNQVREDGFEWQIPGVRRELAIA
LIKSLPKPLRRNFVPAPNYAEAFLARTTPLEKGVLDALERELRLMTGVTVPREAWQWDQV
PDHLKITFRVIDEKNRTQREGKDLSALKDQLKDKVQQTLSSVVDDGLEQRGLHVWSFGSL
PDCYEQKRGGYSVKAYPALVDEKDSVAIRLFDTPHQQQQVMRQGLRRLLLLNIPSPIKYL
HEKLPNKAKLGLYFNPYGKVLDLIDDCIACAVDKLIESSGGPVWQEDAFQQLHEKVRAEL
NETVVDIAKQVEQILTAVFAINKRLKGRVDMAMALALSDIKSQLSGLVFRGFVTQNGWQR
LPDVLRYLHAIERRLEKLAQDVHRDRAQMLKVEQVQQAWQQWSNKLPMERRDDDDVKAVR
WMLEELRVSYFAQQLGTPFPISDKRVLQAMEQIEG
NT seq
3888 nt
NT seq
+upstream
nt +downstream
nt
gtgaaatcacctctcagtgcattatctacgcagttaagtgagctaatgcttcgcgatcgg
caacgtttgcgccgtcgcttgcagggcgcagcgaagatcagcagcccgcaggctcaggcc
gcgatcgctcaggaaattgagggggaaattgttgcggcgcgccagaaagttgagaatcgg
cgggcaaactgtccgacaattcactaccctgagcagttgcccgttagtcagaaaaaagac
gagatattggaggcgctgcgtcatcatcaggtgattatcgtcgccggtgaaacgggatcg
ggtaagaccacgcagttgccgaaaatctgtctcgaactggggcgtggtgtgcatggtctg
attggccacacgcagccacgccgtctggctgccagaaccgtcgccgaccgtattgccgca
gagttggaaacgccgctgggtggcagcgtcgggtataaagtccgttttaacgatcaggtc
ggtgacaatacgctagtcaaactgatgaccgacggtattctgctggcggaaattcagcag
gatcgcctgttgatgcagtatgacacgctgatcatcgatgaagcgcacgagcgcagcctg
aatatcgatttcatcatgggctatttgcgccaactgttgccaaagcgccctgatttaaaa
gtgattatcacctcggctaccatcgatccgcagcgcttctcacgccattttaataatgca
ccgatcattgaagtatcgggtagaacgtatccggtggatgtgcgttaccgtcccgtggtg
gaagacgctgatgacagcgagcgcgatcagctacaggcgatttttgatgccgttgatgag
ctgacgcgcgaagggccaggtgacatactggtcttcatgagcggcgagcgtgaaatccgc
gatacggcagaggcgttgacccgtctggatttgccgcataccgaaattttgccactgtat
gcacgtttgtcgaatcaggagcaaaaccgtgtctttcagtcacatcatggtcgccgcatc
gtgctggcgaccaacgtggcggaaacttcactcaccgtgccggggatccgctatgtgatc
gatcccggtactgcgcgtatcagtcgctatagcttccgcactaaggttcaacgtctaccg
attgaaccggtctcgcaggcatcggcgaatcagcgtaaagggcgctgtggtcgtgttgcc
gctggggtgtgtattcgcctctattccgagcaggatttcctctctcgacctgagtttacc
gatcccgaaattcttcgcaccaatctggcttccgtcattttgcaaatgacgtcgctgggg
ttaggggacatcgccgcgttcccgtttgttgaagcgccggataagcgcaacattcaagac
ggcgtgcgcttgctggaggaactgggcgcgattcatctggcagagaacgggcattaccat
ctaacgccgcaagggcagcagttagcgcaattgccgattgatccacgcctggcgcgtatg
gtgctggaagcacgtaaaatgggctgtgtgcgtgaggtgatggtaattactgccgcgctg
tcgattcaggacccgcgcgaaaggccgatggataagaagcaggcgtcagatgaaaaacac
cgtcgctttgccgataaagactctgattttctggccttcgtcaatctgtgggactatctg
cgtgagcagcagaaggcgctgtcttccagccagttccggcgtcagtgccgtaccgatttc
cttaactacctgcgcgttcgtgaatggcaggatatctacacgcagttgcgtcaggtggtg
aaagagttggggttgccggtcaacagtgaaccggctgattatctgagtattcactgctcg
ctgctcactggcttgttgtcgcatatcggacagaaagatattgagaaacaagaattcagc
ggcgcgcgtaacgcccggtttgccatcttccctggctccgggttattcaaaaagccgcct
aagtggacgatggtggctgaactggtggaaaccagccgcctatggggacgcatcgccgca
cgtattgaacctgagtggatcgaaccgctggctccgcatctgattaaacggagctacagc
gatcctcactgggagaaagcgcagggcacggtgatggcgcaggagaaggtgacgctcttc
gggctgccgattgttgcggcgcgtaaggtgaactacagcccaatcgatccgacgctggca
cgtgagatgttcatccgccacgcgctggtggaaggcgattggcaaacgcatcacgctttt
ttccgcgccaacctcaagttgctggcggaggtggaggatttagagcataaatcgcgccgc
cgcgacattttggtggacgatgaaacgctgtttgcgttttacgatcggcgtttgccgcat
gacgttgtgtcgtcacgccattttgacaaatggtggaaaggtgccagccgcgacaacgcc
gatctgcttaattttgaaaaaagcatgttgattaaagacggcgcggaaaaggtgagtgcg
ctggattacccgaatttctggcatcaggacaacttgaaattacgcttgtcctatcagttt
gagccgggcacggatgcggatggggtaacggtacacattccgctgcctattctcaatcag
gtgcgggaagatggcttcgagtggcagattcccggcgtgcgtcgcgaactggctatcgcg
ctgattaaatcgttgcctaagccgttacgccgtaactttgtccctgcaccgaactatgca
gaggcgtttctggcgcgtaccacgcccttggagaaaggggtattggatgcgctggaacgt
gaactgcgtctgatgacgggcgtcacggtgccgcgtgaggcatggcagtgggatcaggtg
cccgatcatctaaaaatcacgttccgcgttatcgatgagaaaaatcggacgcagcgagaa
ggtaaagacctgagtgcgctgaaagatcagctcaaggataaagtgcaacaaacgctgtca
tccgtggtggatgacgggctggagcagcgtggtctgcacgtctggagctttggttcactt
ccggattgttatgagcagaaacgaggtggctactcggtcaaagcctatcctgcgttggtg
gatgaaaaagacagcgtggcgatccgcttgtttgacacaccacaccagcaacagcaggtc
atgcggcaggggctgcgtcgtctgttgttattgaatattccgtcgccgatcaaatacctg
cacgaaaaactgccgaacaaggcgaaactcggcctctatttcaacccctatggtaaggtg
ctggatctcatcgatgactgtatcgcctgcgcggtagacaaactgattgaatcatccggt
ggtccggtctggcaggaagatgcatttcagcagttgcatgaaaaagtacgtgcagagctg
aacgaaacggtggtggatatcgccaaacaggttgagcaaatcttgacagcggtgttcgcc
atcaacaagcggctgaaagggcgtgtagacatggcaatggcgctggcattgagtgatatc
aagagccagttgagcggtctggtattccgtggttttgtgacccagaacggttggcaacgc
ctgccggatgtactgcgctatctgcatgcgatagaacgccgtctggagaagctggcgcag
gatgtccaccgtgacagggcgcagatgctgaaagttgaacaggttcaacaggcatggcag
cagtggtcgaataagttgcctatggaacgacgtgacgatgacgacgtgaaggcagtacgc
tggatgctggaagagctgcgcgtcagttactttgctcaacagctagggacaccgttcccg
atctcggataagcgcgtattgcaggcgatggagcagattgaagggtaa
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