Pyrus x bretschneideri (Chinese white pear): 103928546
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Entry
103928546 CDS
T03446
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37-like
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxb03019
]
103928546
03041 Spliceosome [BR:
pxb03041
]
103928546
03036 Chromosome and associated proteins [BR:
pxb03036
]
103928546
Enzymes [BR:
pxb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103928546
Messenger RNA biogenesis [BR:
pxb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103928546
mRNA cycle factors
Common to processing body (P body) and stress granule
103928546
Spliceosome [BR:
pxb03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103928546
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103928546
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
103928546
NCBI-ProteinID:
XP_009335876
LinkDB
All DBs
Position
Unknown
AA seq
621 aa
AA seq
DB search
MRTSWADSVANSQGENSTAGSSDNNSSSRPTRSTYVPPHLRNRPPSSDAPAPSQPAPSPA
NDRVGYNGPAPGPAWGAGSSRRDVGRPGYGSSGGRGGGGWNNRSGGWDRGREREVNPFAD
EDISEPTFSDQENTGINFDAYEDIPVETSGDNVPPPVNTFAEIDLGEALNLNIRRCRYVK
PTPVQRHAIPISLGGRDLMACAQTGSGKTAAFCFPIISGIMLGQFAQRPRGARTVYPLAL
ILSPTRELSCQIHEETRKFAYQTGVKVVVAYGGAPINQQLRELERGVDILVATPGRLVDL
LERARVSLQMIRYLALDEADRMLDMGFEPQIRKIVEQMDMPPPGLRQTMLFSATFPKEIQ
RLASDFLSKYIFLAVGRVGSSTDLIVQRVEFVHESDKRSHLMDLLHAQRENGAHGKQSLT
LVFVETKKGADALEHWLCMNGFPATTIHGDRTQQEREHALRSFKSGNTPILVATDVAARG
LDIPHVAHVVNFDLPNDVDDYVHRIGRTGRAGKSGLATAFFNENNLSLAKPLADLMQEAN
QEVPAWLTRYASRASYGGGGRRRSGGGRFGGRDFRRDGSSGRGSDFYSGGSSGGGYGNSG
GYGGGSGGYGAGNGGMTSAWD
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgagaacttcatgggcggattctgtagcaaattctcaaggagagaattcgactgctggt
tcatctgacaataacagctcatctcgccctacacgatcaacttatgtcccaccacatctt
cgtaataggccgccttcttctgatgccccggctccttcacagcctgccccatcaccagcc
aatgaccgtgtaggttacaatgggcctgcgcctggccctgcctggggtgctggcagttct
aggcgtgatgttgggcgcccgggatatggttccagtggtggtcgaggtggtggtggttgg
aacaatagaagtgggggatgggaccgtgggagggagcgggaagtaaacccttttgctgat
gaagacatctcagaaccgacgtttagtgatcaagaaaacacaggcattaactttgatgct
tatgaggatatcccagtggaaactagtggggataatgtgccaccacctgtgaatactttt
gcagagatagacttaggggaggcattgaatttaaatattcggaggtgcaggtatgtgaag
ccaactcctgttcagcgtcatgcaatacctatttctcttggaggtagagatttgatggct
tgtgctcagacgggttcagggaagacagctgctttctgctttccaattattagtggaatc
atgctggggcagtttgctcagagacctcgtggagcacgtactgtgtaccctcttgctctt
attctctcacctaccagggaactctcttgccagatccatgaagaaactagaaaatttgct
tatcaaactggtgtcaaggtggtagttgcttatggaggagcaccaataaaccaacagttg
agagaacttgagagaggagttgatattcttgtggcaactccgggacgattggtagatctg
cttgagagggcaagagtgtcattgcaaatgatcagatatttggctcttgatgaggcagat
aggatgctggacatgggttttgagcctcaaattaggaagatagtggagcagatggacatg
cctcccccaggtttgcgacagaccatgctgtttagtgctacgtttccaaaggagatacag
cgactggcatcagattttctttcaaaatatatatttttggctgttggaagggttggttca
agtactgatttaattgttcaaagagttgaatttgttcatgagtctgataaacgaagtcat
ctcatggacctccttcatgcacagagggaaaatggagctcatggcaagcaatctctgaca
ttagtttttgtggagacaaagaagggagctgatgcattagaacactggttgtgcatgaat
gggtttccggcaactactattcatggtgacagaacacaacaggaaagagaacatgcattg
agatcattcaagagtggaaatacaccaattttagtggcaacagatgttgctgcacgtggt
ctagatatcccccatgtagctcatgtggtaaattttgatcttccaaatgacgttgatgat
tatgttcaccggataggtcggacagggcgagctggcaagtcaggattggcaactgccttc
tttaatgagaacaatctctcattggcaaaaccactcgctgatctaatgcaagaagcaaat
caggaagtacctgcttggcttactcgttatgcatcaagggcttcttatggcggtggaggc
agaaggcgatctgggggaggtcggtttggtggccgtgatttcagaagggacggctcttcc
ggtaggggttcagatttttacagtggaggaagcagtggtggtggatatggcaactctggt
ggctatggtggtggctctgggggttatggtgccggtaacggtggtatgaccagtgcctgg
gattag
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