Pyrus x bretschneideri (Chinese white pear): 103946696
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Entry
103946696 CDS
T03446
Name
(RefSeq) RNA-dependent RNA polymerase 6
KO
K11699
RNA-dependent RNA polymerase [EC:
2.7.7.48
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pxb03036
]
103946696
Enzymes [BR:
pxb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.48 RNA-directed RNA polymerase
103946696
Chromosome and associated proteins [BR:
pxb03036
]
Eukaryotic type
Gene silencing
RNA interference (RNAi) pathway
RDRC (RNA-directed RNA polymerase complex)
103946696
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RdRP
UTP20_N
Motif
Other DBs
NCBI-GeneID:
103946696
NCBI-ProteinID:
XP_009355733
LinkDB
All DBs
Position
Unknown
AA seq
1197 aa
AA seq
DB search
MESEASETSTVVTQLSFGGFGRHVKASDLVTYLEDEIGLVYRCRLKTSWTPQESFPNFEL
IDTSNIARTNDYIMVEPHAFVHFAMTESVTSAMDAAGRSQLFYNNEPLKVSLGPENPYFL
NRRRRDKTPFKLSDVCVEIGSLVHQDEFFVAWRGPAYGVDFIVDAFDGTCKFCFTRDIAF
SFKGIRKHAVIKCDFMVEFLVRDISEIKQYTDTAYHVILLRLASSPLVSYRTADDDIDQS
VPFNLLDDDDPWIRTTDFTPSGAIGRCNCYRVSIPPRHGAKLKRTMAYLRECRVREVCLK
RPPKVQNEPDFGMPASDPFFCIHYKDDISFEIMFLVNAVMHKGIFNQHQLSDSFFDLLRS
QPKEVNLAALKHLCTYKHPEFDACKRLKVVQDWLLKNPKLFKDPKRLDDISEVRRLIITP
TKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQTINSHVLNSYVAPIVKEIMTNA
SPQKTNVFKRVKTILTDGFYLCSRKYSFLAFSSNQLRDRSAWFFAEGMNITILDIKTWMG
KFANKNIAKCAARMGLCFSSTYATVDVPLSEVNFALPDIKKGKYDFSDGIGKITPDLAMK
VAEKLKLDRDPPCAYQIRYAGCKGVVACWPSNGDGHRLSLRPSMNKFESCHTILEICSWT
RLQPGFLNRQIITLLSALDVPDEIFWRMQERMVLRLNQMLVDTDVAFDVLTGSCAEQGNA
AAIMLSAGFKPQTEPHLRGMLTCIRAAQLWGLREKARIFVPSGRWLMGCLDELGVLEQGQ
CFVRVSTPSLQNCFANHGSRFDKIENNLQVIKGLVVIAKNPCLHPGDIRILEAVDAPELH
HLHDCILFPRKGDRPHTNEASGSDLDGDLYFVTWDEDLIPPSKKSWTPMLYDPQEAKPHG
RPITQTDIINFFAKNMVNENLGAICNAHVVHADRSDYGAMDENCLLLAEYAALAVDFPKT
GKTVALPAHLKPKMYPDFMGKEEYQTYKSTKILGRLYRHIRDAYDEEMATSLELNYTPGD
IPYDMDLEIPGATDFIADAWEKKCSYDGQVKGLMGQYKVKREEEIVTGHVWSIPKSNSKK
QGELKERLKQSYSALKKEFRLVFENRDSNIESLTDDERSILYEQKASAWYQVTYHPKWVK
RSIHLQEPDVAGNVALLSFAWITADYLARIKIKRRGVEHIDSSKPINSLSKYLADRM
NT seq
3594 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgaagcaagtgaaactagcacagtggtaactcaacttagttttggtggattt
ggtagacatgtgaaggcaagcgatcttgtaacgtacttggaagatgaaattgggcttgta
tataggtgccggttgaaaacatcttggacccctcaagagtcctttccaaattttgagctc
attgatacttcaaatattgcaagaacaaatgattatatcatggtggagcctcatgcattt
gtgcattttgccatgactgagtcagtaacttctgctatggatgcagcagggcgttctcaa
cttttttacaacaatgaaccattgaaagtaagtttgggccctgagaatccatatttcttg
aataggaggaggagggataaaactccattcaagttatctgatgtatgtgtcgagattgga
agtttagttcatcaagatgagttttttgttgcttggagaggacccgcttatggtgttgac
tttattgtggatgcctttgatggaacatgcaaattttgttttaccagagacattgcattt
tcatttaaagggataaggaagcatgcagtcattaaatgcgattttatggtagagttcttg
gtaagagacatttccgaaatcaagcaatacacagatactgcatatcatgtaattctgttg
cggctggcttcatcacccttggtttcgtatagaactgctgatgatgacattgaccaatca
gtcccatttaatctgttggatgatgatgatccttggattagaacgacagattttactcct
agtggggctattgggcgttgtaattgctacagagtttcaatacccccccgacatggtgca
aagttgaagaggactatggcttatcttcgagaatgcagggtgcgggaggtttgcctcaaa
aggcctcctaaggttcaaaacgaacctgattttggaatgcctgcttcagatcctttcttc
tgtattcattataaggatgatatttcgtttgagataatgttcttggttaatgcagtaatg
cacaagggcatttttaatcagcaccagttgtcggacagtttctttgatttactgaggagc
caaccaaaggaggttaatttggctgcattgaagcacttgtgcacttacaagcacccagaa
tttgatgcctgtaagagactgaaagttgttcaagattggttgctgaagaaccccaagctt
ttcaaggatcctaagcgattggatgacatttctgaagttaggaggttgattatcacccca
actaaagcctattgtcttccaccagaggttgaactttccaatagggttcttagaaagtat
aaggaagttgctgatcggttcttaagggttacctttatggatgaaggtatgcagacaatc
aactctcatgttctgaactcttatgttgctcctattgtgaaggaaattatgacgaacgcc
tctcctcagaagacaaatgtattcaaaagggtgaagacaattttgactgacggcttttac
ttgtgtagtcgtaagtactctttcttggccttctcatccaatcaattgagggaccgttct
gcctggttttttgctgaaggcatgaacattactatccttgacatcaaaacatggatgggg
aagttcgccaacaaaaatattgctaaatgtgctgctaggatgggcctatgcttttcgtct
acatatgcaacagtagatgttccattaagtgaagttaattttgcccttccagatatcaag
aagggtaagtatgatttttctgatgggattggtaagattactcctgaccttgcaatgaaa
gtcgctgagaagttgaaacttgacagagatccaccttgtgcatatcaaataagatatgct
ggctgtaaaggggttgtggcttgttggccatccaatggtgatgggcaccggctttcttta
aggcctagtatgaacaagtttgagtcatgccatactatactggaaatttgttcttggact
aggttgcagccgggttttctgaacaggcagattatcacattactgtctgcactggatgtt
ccagatgagatattctggagaatgcaggagagaatggttttaaggttaaaccagatgctt
gtggacacggatgtggcatttgatgttctcactggctcttgcgctgagcaaggaaatgca
gcagccataatgctgagtgctggtttcaagccccagacagaacctcatctacggggcatg
ttaacctgtatacgagctgctcagctctggggccttagggaaaaggctaggatttttgtt
ccttctggaagatggcttatgggatgtctagatgagctaggggtacttgagcaaggccag
tgctttgtccgagtgtctaccccgtcgctacagaattgttttgccaatcatggctctagg
tttgataagattgagaacaatcttcaagtgattaaggggcttgttgtgatagcaaagaat
ccctgccttcatcccggagatataaggattcttgaagcagttgatgcccctgagttacac
cacttgcatgattgcattcttttccctcggaagggtgataggccccacacaaatgaagct
tctggaagtgacctcgatggggacctttactttgttacttgggatgaagatcttattccc
ccaagtaagaagagctggactcctatgttgtatgatcctcaagaagccaaacctcatggg
cgtcctataactcagacggatattataaatttttttgcgaaaaacatggtgaatgagaac
ttaggggctatatgcaatgcacatgtggttcatgctgaccgtagtgattatggggctatg
gatgagaactgccttctattagctgagtatgcagcattagcagttgattttccgaaaact
ggaaagactgttgccttgccagcacatctaaagccaaagatgtaccctgatttcatgggg
aaagaggagtaccagacgtacaagtcaactaaaattttggggcgactgtatcgccacatt
agagatgcttatgacgaagaaatggcaacctctttggagctgaattatactcccggtgac
atcccatatgatatggatctggagattcctggagccactgattttatagctgatgcgtgg
gagaaaaagtgctcttatgatggccaggtgaagggtctaatggggcaatacaaagttaag
agagaagaagagattgttactgggcatgtttggtccatccccaaatccaacagcaagaaa
caaggagagctgaaggagcggttgaagcaatcctacagtgctcttaaaaaagaattcagg
ctagtttttgagaatagggattcaaatattgaatctcttactgatgatgagaggagtata
ctgtatgagcagaaggcatcggcatggtaccaggtgacttaccacccgaaatgggtgaaa
agatcaatccatttgcaagagccagatgttgctggaaatgtggcgctgttgagctttgcc
tggattacagccgactaccttgcacgaatcaagatcaagcgccgcggagtggaacatatt
gattcttcgaagcctatcaactctttgtcgaagtacctagctgatcgaatgtga
DBGET
integrated database retrieval system
