Pyrus x bretschneideri (Chinese white pear): 103963396
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Entry
103963396 CDS
T03446
Name
(RefSeq) E3 ubiquitin protein ligase RIN2-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pxb
Pyrus x bretschneideri (Chinese white pear)
Pathway
pxb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pxb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103963396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pxb04121
]
103963396
Enzymes [BR:
pxb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103963396
Ubiquitin system [BR:
pxb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103963396
Multi subunit Ring-finger type E3
ERAD complex
103963396
LMBR1L-GP78-UBAC2 complex
103963396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
zf-RING_16
zf-C3HC4_4
E3_UbLigase_EDD
Endonuclease_7
zf-HC5HC2H
PHD
Motif
Other DBs
NCBI-GeneID:
103963396
NCBI-ProteinID:
XP_009374481
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MGLRYIAISAACTAISFAGLQLWTETSLVKLKSDGLIAENLINAANFGHVFDLLLGSYTT
VGLLANFVLNAFILLVLCLKTIFFVELYPSETRKLIERLVNYVIYKGTFLPLVIPPTIYH
AGMWSVWLIVLCSLKMFQALARDRLERLNASPSATPWTYFRVYSVLLLVLTVDIFWIRLC
VVIYKTLGLSMFLLLLFEPFSIAFETLQAILVHGFQLLDIWIHHSAWDSSNCEGSKLFDT
SAAGLLLEWKGSLTRNLGFVLDMATLLMALGHYVHIWWLHGMAFHLVDAILFLNIRALLS
AILKRIKGFIKLRKALGALHAALPDATSEELQAYDDECAICREPMAKAKRLHCSHLFHLA
CLRSWLDQGLNEIYSCPTCRKPLFVGRPENEVHPRSEETSNDEQLARQISSGLDRQNTPG
HVIPAGVFPNQAQNPAEGDPWRGAGLDPDWLHTWPSQGVDGAGPSTAIGSVGLGRVQMMM
RHLASVGETYAQTALEDSAWSLWPMNAPQVAATGPSIPPADDGRNHGGARNLYTRTPSRS
VNDNLANILAMAETVREVLPHMPDDLIFQDLQRTNSVTVTVNNLLQM
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgagatatatagccatctctgcggcatgtacagcaataagctttgcgggtctc
cagttgtggacggaaacttctttagttaaactaaaatcagatggactgattgcggagaat
ttgattaatgcggccaattttggccatgtatttgatctgcttttgggttcttatactacc
gttggactgctggcaaattttgtactcaatgcatttattttactcgttctatgtctcaag
actatattctttgtggagttgtatccttctgaaactcgcaaattaattgaacgccttgtc
aattatgttatttacaagggcacttttctacccctggtcatccctcctacaatatatcat
gcgggcatgtggtcagtctggttgattgttctttgttctttaaagatgtttcaagctttg
gctcgagatcgacttgaacggttgaatgcatccccttctgccacaccatggacatatttt
cgtgtgtattcagtgttattgctggtgctcaccgttgacattttctggataaggctgtgt
gtggtgatatataaaacactgggtttatccatgtttctcctgttattatttgagcctttc
agtattgcatttgagacactgcaggctattttggtgcatggatttcagttacttgatata
tggatccatcattcagcatgggacagttcaaattgcgaggggtctaaattatttgataca
tcagcagctggtttattgttggaatggaaaggcagtcttactcggaatttgggatttgtt
cttgatatggcaacattgttaatggcccttggtcactacgtgcatatttggtggcttcat
ggcatggcattccatctggtggatgcaatcctttttctaaacatacgtgccttgctaagt
gcaattttaaaacgtataaaggggttcatcaaactgaggaaagccttaggtgctcttcat
gcagcacttccagatgcaacatctgaagaactacaagcatatgatgatgaatgtgcaatt
tgtagggaacctatggctaaggccaaaagactacactgcagtcacctttttcatcttgca
tgcttgagatcttggttggatcaaggtttgaacgagatatattcatgtccaacttgtcgc
aagccactttttgtgggcagacctgaaaatgaagtacatccccgcagtgaagaaacttcg
aatgatgagcagcttgctcgtcaaataagttcaggacttgatcgacaaaatactcctgga
catgtaatacctgctggtgtgtttcccaatcaggctcagaaccctgcagaaggcgatcca
tggaggggtgcaggactggatccagattggttgcatacttggccaagtcagggagttgac
ggggcaggtccttctacagccataggatctgttggactggggagagttcagatgatgatg
aggcaccttgcatctgtaggggagacgtatgcccaaacggccctcgaagatagtgcgtgg
agcctctggcctatgaatgcccctcaggttgctgctactggtccatctattcctcctgct
gatgatggaagaaaccatggaggagcacgaaatttatatacgaggaccccctcacgtagt
gtgaatgacaacctagcaaacatacttgccatggctgagacggtgagggaagttctgcct
catatgccagatgacctaattttccaggatttgcagcgaacgaattcagttacagttact
gtgaataatcttctccaaatgtga
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