Paenibacillus xylanexedens: BS614_06150
Help
Entry
BS614_06150 CDS
T04676
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pxl
Paenibacillus xylanexedens
Brite
KEGG Orthology (KO) [BR:
pxl00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
BS614_06150
Enzymes [BR:
pxl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
BS614_06150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP
FG-GAP_3
Motif
Other DBs
NCBI-ProteinID:
APO48084
UniProt:
A0A1L5LXH0
LinkDB
All DBs
Position
1351713..1353536
Genome browser
AA seq
607 aa
AA seq
DB search
MLSSALLVTSLGLGNMSVTHAAGARQMEYLDRGVVAVKTGTGVFVSWRLLGTEGSNVSFN
VYRDGTKVNATPITNSTNLQDASGTSSSKYTVRAVVSGTEQAASAAASVWGNNYLSVPLS
VPAGGTTPDGVAYTYSANDASAGDLDGDGEYELIVKWDPSNSKDNSQSGYTGEVFIDAYK
LNGTRLWRISLGKNIRAGAHYTQFMVYDLDGDAKAEVAMKTADGTKDGTGVVIGDASKDY
RNSSGYVLSGPEFLTVFNGQTGKALSTVNYEPARGNVSDWGDNYGNRVDRFLAAIAYLDG
ERPSLVMARGYYTRSVLVAYNWRNGQLTKQWTFDSNTSGNSGYAGQGNHNLSVADVDGDG
KDEIVYGAMAVDDNGKGLYTTGLHHGDAMHLSDLDPDRPGLEVFQVHETPSNAGVEFRDA
GTGQLIWGVKTTKDIGRGMAADIDPRYKGAEVWADGSLYTAKGQKLGTTLPSSTNFGIWW
DGDLLRELLDSNRIDKWNYANSTTMNLLTASGVSSNNGTKSTPNLQADLFGDWREEVVWR
TNDSSAMQIYTTTAVTDKRIYTLMHDPVYRLGVAWQNVAYNQPPHTGFYLGEGMSTPPVP
NIRYAGR
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
ctgctaagttccgcgttactggttacttcgcttggccttggcaacatgtcggtaacacat
gcagcgggagcaaggcagatggaatatctggatcgcggtgtggtggctgtgaagaccggg
acaggtgtgtttgtcagttggcggcttctgggaacggaaggatcgaatgtatcgtttaat
gtctatcgagatggaaccaaggtgaacgctacgcccataacaaacagcaccaaccttcag
gatgcaagcgggacaagcagttccaaatatacggttcgcgctgtcgtcagtggaacggag
caggctgcttcagcggcagcaagcgtatggggcaataactatctatctgtaccgctcagt
gtacccgcaggtgggacaacgcccgatggagtagcctacacctacagtgccaatgatgcc
agtgcaggtgacctggatggtgatggggagtatgaattgatcgtgaagtgggacccttcc
aactccaaggataactcccagagtggttataccggggaagtatttatcgatgcctacaaa
ttaaatggaacacgactctggcgaattagtctgggcaaaaatatccgtgccggcgctcac
tacacccagttcatggtgtatgatctcgacggtgacgccaaagccgaggttgcgatgaaa
acagccgatggcaccaaggatggcactggtgtggtcatcggtgatgcaagcaaggattac
cgcaattccagcggttatgtattatctggccccgaattcctgacggttttcaatgggcag
accggcaaagcactctccacggtgaactacgaaccggcgcgcggcaatgtgtccgactgg
ggagataactatggaaaccgggtggatcgtttccttgccgccattgcttatctggatggg
gagcgcccaagtctggtcatggcgcgtgggtactatacgcgaagtgtgctcgtggcctat
aactggcggaatggacagctgaccaaacaatggacatttgattccaatacctcgggtaac
tcgggctatgccgggcagggcaatcataatctgagtgtggcggacgtagacggagatggg
aaagacgaaatcgtttatggtgccatggcagtggatgacaacggcaaaggattgtacaca
acaggacttcatcatggcgatgccatgcatttgagtgacctcgacccggaccgccctgga
cttgaggtatttcaggtccatgagacaccgtccaatgccggcgttgaattccgtgatgca
ggtacaggtcagttaatctggggagtcaaaacaacgaaggatattggacgcggcatggcg
gcagatatcgatccaagatataaaggcgctgaagtatgggcagacggcagtctgtatacg
gccaaagggcagaaactcgggacaaccctaccgtcctccacgaattttggcatctggtgg
gatggggatttgctccgtgaactgctggacagcaaccgaatcgacaagtggaattatgcc
aacagcacaacgatgaacctgctcaccgcatccggcgtttcttccaacaacggaaccaaa
tctacgccgaatctgcaggcggatctgttcggggactggagagaagaagtggtatggcgg
accaatgacagttcggcgatgcagatctataccacaacagcagttacggacaaacgcatc
tatacgctgatgcatgatccggtgtaccgtcttggtgtcgcttggcaaaatgtagcctac
aatcaaccgccacacaccggtttttatctgggagaaggcatgagcacaccaccggtaccc
aatatccggtatgcgggcagatga
DBGET
integrated database retrieval system
