Pseudobutyrivibrio xylanivorans: FXF36_08885
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Entry
FXF36_08885 CDS
T06217
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pxv
Pseudobutyrivibrio xylanivorans
Pathway
pxv03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pxv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FXF36_08885 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pxv03400
]
FXF36_08885 (uvrA)
DNA repair and recombination proteins [BR:
pxv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FXF36_08885 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FXF36_08885 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
AAA_16
RsgA_GTPase
nSTAND1
AAA_22
BCA_ABC_TP_C
AAA_23
AAA_25
cobW
Viral_helicase1
SLFN-g3_helicase
Zn_Tnp_IS91
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
QFJ54965
UniProt:
A0A5P6VQL2
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All DBs
Position
1:complement(1952889..1955711)
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AA seq
940 aa
AA seq
DB search
MKERKYIKIKGANEHNLKNISIDIPRDEFVVLTGLSGSGKSSLAFDTIFAEGQRRYMESL
SSYARQFLGQMEKPNVEHMEGMPPAISIDQKSTNHNPRSTVGTVTEIYDYMRLLYARCGV
PHCPNCGKPISKQTVDQMVDAIMALPERTKIQLLAPVVRGRKGTHEKLFEKAKKSGYVRV
NVDGNVYDLSEEIKLDKNIKHNIEIVVDRLVIKEGIEKRLTDSIEAVLKLADGLMIVDVI
DGEPIRFSEGFSCPDCGISIDEVEPRSFSFNNPFGACPECFGLGYKMEFDEDLMIPDKSL
SFNEGCVQVMGWQSSNKKGSFAHALLEALASEYDFSLDTPYKELPEKIRDMFLHGFDRSV
DVHYEGQRGRGVYPTVFEGLIENVNRRYKETFSESAKREYEEFMFYSECPCCHGQRLKKE
SLAVTIADKNIFEMTQYPVHELYDLIENLKLTEQQMKIGAVVLKEIRNRLKFMVDVGLDY
LTLARATASLSGGEAQRIRLATQIGSGLVGVAYILDEPSIGLHQKDNDKLLASLKGLRDL
GNTLIVVEHDADTMKAADYLVDIGPRAGKDGGEVVAAGTPEEIMANPNSITGQYLSGKLC
IPVPSERREPKGWLTIKGAREHNLKNIDVDIPTGIMTVVTGVSGSGKSSLINEILYKDLA
KRLNRARKISGKHDDILGVEVLDKVIDIDQSPIGRTPRSNPATYTGVFDLIRDLFAGTTE
AKERGYNKGRFSFNVKGGRCEACSGDGIIKIEMHFLPDVYVPCEVCGGKRYNRETLEVHY
KGKTIYDVLDMTVEEACEFFKNVPSIYNKIQCLYDVGLGYIKLGQPSTTLSGGEAQRIKL
ATELSRRATGKTIYILDEPTTGLHFDDVNKLVEIMRKLSDSGNTVVVIEHNLDVIKCADY
IIDMGPDGGDRGGTVIAKGTPEEIVKVKRSYTGQYLKDYL
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagaaagaaaatatataaagattaaaggcgcaaatgagcataacctaaaaaatatt
agtattgatatcccaagagacgaattcgttgtcctcacaggactttccggctcgggaaaa
tcttccttagccttcgatacaatctttgccgagggacagcgtcgctacatggagtcatta
tcatcctatgcacgtcagttcttgggccagatggaaaagccaaacgtggagcatatggaa
ggaatgcctccggctatctcgattgaccagaagagcacaaaccacaatccacgttctaca
gtgggtacagttacagaaatttatgactacatgagactgctttatgcccgttgcggagtg
ccacactgccctaactgtggtaagccaatcagcaagcagactgtagaccagatggtagat
gctattatggctcttccagagcgtactaagattcagcttcttgcaccagttgtaagaggt
cgcaagggtacccatgagaagctatttgaaaaggcaaagaagtcgggctatgttcgtgtt
aatgtagatggaaacgtatatgacctttcagaggaaataaagcttgataaaaatataaag
cacaacattgaaatcgttgtagaccgtcttgtaataaaggaaggcattgagaagcgtctt
acagattccatcgaggctgttttaaaactggctgatggactgatgattgtagatgtaatc
gatggagaaccaatcagattttctgagggattctcatgcccagattgtggaatcagtatc
gacgaggtagagccacgtagcttctccttcaacaatccatttggtgcctgcccagagtgc
tttggtttgggatataagatggaattcgatgaggatcttatgattcctgacaagagcctg
tctttcaacgaaggttgcgtccaggttatgggatggcagtcttctaataaaaagggcagc
ttcgctcacgcgctgttagaagcattggcttctgaatacgatttctcattggatacacct
tacaaggagcttccagaaaagattcgtgacatgttccttcatggctttgaccgttcagta
gatgtgcattatgaaggacagcgtggacgaggagtttatcctacagtattcgagggacta
atagaaaatgttaacagacgctataaagagaccttctctgaatcagcaaagcgtgaatat
gaggaattcatgttttatagtgaatgtccttgctgtcatggtcagcgtctgaagaaggaa
agccttgctgttacaattgcagataaaaatatctttgagatgacccagtaccctgttcac
gagctatacgatttgattgaaaatcttaagcttacagaacagcagatgaagattggtgct
gtggttcttaaagaaatcagaaatagattgaaattcatggtggatgtgggattggattat
ctcacccttgccagagctacagcttctctttcaggtggagaggctcagcgaatccgtctt
gccacacagattggttcgggtctggttggcgtagcctacattttggatgagccatctatt
ggccttcaccaaaaggataatgacaagttattagcatcccttaagggattgagagatctt
ggaaatacgctaattgttgttgaacacgatgcggataccatgaaggctgcggattatctt
gtggatatcggacctcgcgcaggcaaggatggtggagaagtggttgctgcgggtactcca
gaggagattatggcgaaccctaattccatcacaggtcagtacctcagtggaaagctttgc
atccctgtcccatcggagcgcagagaaccaaagggatggcttactataaagggtgcaagg
gagcacaaccttaagaatatagatgtagatattccgacaggaatcatgactgttgttaca
ggtgtatctggttcaggaaagagctcacttatcaacgagattttatataaggatctggca
aagcgccttaatcgcgcaagaaagatttctggaaagcatgatgatattcttggtgtggag
gttcttgataaagtaattgatatcgaccagtcacctatcggacgtacacctcgttcaaat
cctgctacctatacaggcgtattcgatttgattcgtgatttattcgccggtactacagaa
gcaaaggaacgcggttacaataaggggcgcttctccttcaacgtaaagggcggtcgctgt
gaagcctgctctggagatggaatcatcaaaatcgaaatgcatttccttcccgacgtatat
gtgccttgtgaggtatgcggtggaaaacgttacaaccgcgagaccttagaggtccactat
aaaggtaagaccatctatgatgtgcttgatatgactgttgaggaggcttgcgagtttttc
aaaaacgtaccaagtatttacaacaagatacagtgtctgtatgacgttggacttggctat
atcaagcttggacagccatctacaaccttgtccggtggagaggcacagagaatcaagctt
gccacagagctttcgcgtcgagctactggaaagactatttatattcttgatgagcctacc
acaggtttgcattttgatgatgtgaataagcttgttgagattatgagaaagctttctgat
tctggaaacactgttgtggtaatcgagcataatctggacgtaatcaagtgtgcagattac
atcatcgacatgggacctgatggtggagaccgcggcggcactgtgattgctaaaggaaca
cctgaggaaatcgtaaaagtaaagcgtagttatacgggccagtatcttaaagattatcta
tag
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