Plutella xylostella (diamondback moth): 105396873
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Entry
105396873 CDS
T03915
Name
(RefSeq) superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pxy
Plutella xylostella (diamondback moth)
Pathway
pxy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pxy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105396873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pxy03019
]
105396873
03041 Spliceosome [BR:
pxy03041
]
105396873
03009 Ribosome biogenesis [BR:
pxy03009
]
105396873
03016 Transfer RNA biogenesis [BR:
pxy03016
]
105396873
Enzymes [BR:
pxy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
105396873
Messenger RNA biogenesis [BR:
pxy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
105396873
Spliceosome [BR:
pxy03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105396873
Complex C
U4/U6.U5 tri-SnRNP related factors
105396873
Ribosome biogenesis [BR:
pxy03009
]
Eukaryotic type
Pre-60S particles
Helicases
105396873
Transfer RNA biogenesis [BR:
pxy03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
105396873
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
Helicase_C
ATPase_2
Motif
Other DBs
NCBI-GeneID:
105396873
NCBI-ProteinID:
XP_011567188
LinkDB
All DBs
Position
Un
AA seq
1042 aa
AA seq
DB search
MADINSLFDCFEETDENVATKSFPNVKKEETQVSEGTEAAGTEKSQESIEVESPSKKRPH
DDDVEEVTKKPKFEEEGDELLADLNLELLDSRIVIHTLETHEGCTHEVAIPPNHEYAPLV
PNSSEPAKQYSFILDPFQKEAIMCIDNIQSVLVSAHTSAGKTVVAEYAIALSLKNKQRVI
YTTPIKALSNQKYREFSEEFHDVGLITGDVTINPSASCLIMTTEILRNMLYRGSEVMREV
GWVVFDEIHYMRDKERGVVWEETLILLPDNVHYVFLSATIPNARQFAEWVCRLHSQPCHV
VYTEYRPTPLQHYIFPAGGDGMHLVVDEKGIFKEDNFNTAMTVLGNAGDAGKGDQRGRRG
GFKANAAQTNIFNIVKMIMERNFAPVIIFSFSKKDCEAYAMQMAKLDFNTIEEKKLVDEV
FNNAMDVLSEEDRKLPQVENVIPLLRRGIGIHHGGLLPILKETIEILFGLGLIKALFATE
TFAMGLNMPARTVVFTNCQKFDGKDFRFITSGEYIQMSGRAGRRGLDDKGIVILMIDQKV
TPAVVKDMVQGKADPINSAFHLTYNMVLNLLRVEEINPEYMLERSFFQFQNQAAIPDLID
KVKSKQKQYDAVSVEQEHSIASYCSTRSQLQLLGQQFRSFITKPQHLQPFLQPGRLLKIK
TEKHEYDWGITVNFRRQMPKGKKREEENPLTAETVLLVDVLLHVKRGTEDDPEKRVPCPP
GETGDVEVVSVIHTLIDQISTLRVYYPKDLNSSDNRKSVLKTINEVKKRFPEGPPLLNPI
KDMKIQDKVFLECVDNIKLLEERLYAHPLHTDKARGALQAAYERKQELLQELTLAKSELR
KAKSILQMDELKKRKRVLRRMGYCTATDVIELKGRIACELSSADELLLTELIFNGVFNSL
SPEQSAALVSCFVCDENSNQAPNSAADLKTVLRQLQEYARRIAKVSIDAKLDLDEDDYVN
KFKHTLMDVVLAWAKGASFLQICKMTDVFEGSIIRCMRRLEEVLRQLCQAAKNIGNVDLE
NKFSDAIKLLKRDIVFAASLYM
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcagatataaacagtttatttgactgctttgaagaaacagatgaaaatgttgccacc
aagagttttcccaatgtaaagaaagaagaaactcaagtgagtgaaggaaccgaagcagct
ggtacagagaagtctcaggaatcaattgaagttgagtcaccgagcaagaaacgtccacat
gatgatgatgttgaggaagttacaaaaaagccgaagtttgaggaggaaggcgatgaatta
ctggctgatttgaacctagaactcctcgattcccgcatagtaatccacaccttagagact
catgaaggctgcacacatgaggtggccatacctccgaaccatgagtatgctcctctggta
ccaaactcatcagaacctgccaagcagtacagctttattctagatccttttcaaaaggag
gctatcatgtgtattgataatatacagtcagtgctggtttccgctcatacttcggctggt
aaaactgttgttgcagaatatgcaatagcattgtcactgaagaacaaacagcgagtgatc
tacaccactcccatcaaggctctgtccaatcagaagtaccgggagttttccgaggagttt
catgacgtgggtctgatcactggagatgtcaccatcaatccatcagcttcttgccttatt
atgactacagagattctaagaaacatgctgtacagaggatcggaggtgatgagagaagtt
ggatgggtggtgtttgacgagatccattacatgagagacaaggagagaggagttgtgtgg
gaagaaacgctgatcctgctaccagacaacgtgcactacgtgtttctctccgccacgatc
ccgaacgcccgtcagttcgcggagtgggtgtgtcgcctgcactcgcagccgtgccacgtg
gtctacacggagtaccgccccacgccgctgcagcactatatattccctgcggggggagat
ggcatgcatctcgttgttgatgaaaagggaatattcaaagaggacaacttcaacacggca
atgacagtcctgggcaacgcgggcgacgcgggtaaaggcgaccagcgtgggcgccgcggc
gggttcaaggccaacgccgcgcagaccaacatcttcaacatcgtcaagatgatcatggag
aggaactttgcgcctgtcatcatattcagtttcagtaagaaggactgcgaggcgtacgct
atgcagatggcgaaattggattttaatactattgaagagaagaagctcgtagacgaagtg
ttcaacaacgcaatggacgtgctctccgaagaagaccgcaagttgcctcaagtagagaat
gtcattccactactgcggcgaggcatcggcatccaccacggcgggctgctgcccatattg
aaggaaactatcgagatcttgttcggcttggggcttattaaggccctcttcgccacggag
accttcgccatggggctcaacatgcccgccaggaccgtcgtgttcaccaactgccagaaa
ttcgacggaaaagacttcagatttataacatcaggcgagtacatccagatgtcggggcgc
gcggggcggcgcggactcgacgacaagggcatcgtcatcctcatgatcgaccagaaggtc
acgcccgccgtggtcaaggacatggtgcaggggaaggctgatcctatcaactcggccttc
catttgacgtataatatggtactaaacctgctacgagtggaggaaataaatcctgaatac
atgctcgagagaagtttcttccagttccagaatcaggctgccataccagatttaattgac
aaggtgaagtccaagcagaagcagtacgacgccgtatccgtggaacaggagcactccatc
gcttcgtactgcagcactcgctcacagcttcagctgctcggccaacagtttcgttccttc
atcacgaaaccccagcacctacagccattcctgcagccggggaggctgctcaagattaag
acagaaaaacacgagtacgactggggcatcacggtgaacttccgccgccagatgcccaag
ggcaagaagcgcgaggaggagaaccctctgactgcggagacggtgttgttagtggacgtg
ttgttgcacgtgaagagagggacggaagatgacccggagaaacgggtgccgtgtccgccg
ggagagacaggagacgtagaggtggtgtcagtgatccacacactcatagaccagatcagc
actctgcgagtgtactacccaaaggacttgaactcatccgacaatagaaaatctgtacta
aagacaataaatgaagtcaaaaaacggtttcccgaaggacctccactgctcaaccctata
aaggatatgaagatacaagacaaagtgtttttagaatgcgtggataatataaaactctta
gaagaaagactatacgcccacccactacacacggacaaagcgcggggcgccctgcaggcc
gcctacgaacgcaagcaagaactgctacaagaactcaccctggccaagtcagaactaagg
aaagcaaagagtatactgcaaatggacgaactgaagaagagaaaaagagtactgagacga
atgggatactgtacggctactgatgtcattgagttgaagggaagaattgcgtgtgaattg
agcagtgcggacgagctcctcctaaccgagttgatcttcaacggcgtgttcaactcgctg
tcgccggagcagagcgcggcgctggtgagctgcttcgtgtgcgacgagaactcgaaccag
gcgccgaatagtgcggcggatttgaagactgtgctgaggcagttgcaggaatacgcgcgg
cgcatagccaaggtctccatcgacgctaaactggacctggacgaagacgactacgtgaac
aagttcaagcacacgctgatggacgtggtgctggcgtgggccaagggcgcctccttctta
cagatctgcaagatgacagatgtgttcgaaggttcaataatccgctgcatgcgccgtctg
gaggaggtgctgcgtcagctctgccaggccgccaagaacatcggcaacgtggacctcgag
aacaagttcagcgacgccatcaaactgctcaagagggacatcgtgtttgcggccagtctc
tacatgtag
DBGET
integrated database retrieval system
