Pyrococcus kukulkanii: TQ32_03480
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Entry
TQ32_03480 CDS
T04365
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pyc
Pyrococcus kukulkanii
Brite
KEGG Orthology (KO) [BR:
pyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pyc03032
]
TQ32_03480
03400 DNA repair and recombination proteins [BR:
pyc03400
]
TQ32_03480
Enzymes [BR:
pyc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
TQ32_03480
DNA replication proteins [BR:
pyc03032
]
Prokaryotic type
DNA Topoisomerases
TQ32_03480
DNA repair and recombination proteins [BR:
pyc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
TQ32_03480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
DUF4364
ADK_lid
Motif
Other DBs
NCBI-ProteinID:
AMM53646
UniProt:
A0A127BAF9
LinkDB
All DBs
Position
complement(636893..638938)
Genome browser
AA seq
681 aa
AA seq
DB search
MILIIAEKPNVARKIAGALAEGRPVKKSLFGVPYYEFFRDGKKLIVAPAVGHLYGLAPKQ
DFFGYPIFDIEWVPVYIAEKGKEYAKDYIKLLSVLAKRVKGFVVACDYDTEGEVIGYTAL
KYACGVDPGIAKRMKFSALTKRDLVKAWHNLEPTINFGMANAGIARHVLDWYWGVNLSRA
LTHAIKRASGKWIVLSTGRVQGPTLKFLVEREREIQNFVPKPYWVIKLIFEKNGQKFIAN
YEKDKVWDENEARRIVLEAKKGPVRVAGIDVKRQKRNPPVPFDLGTLQREAYSAFGFSPK
KTLDLAQNLYEKGFSSYPRTESQKLPKNLNFRYIIQSLAKMPQYRPYAHILLGMPELKPV
EGKKEDPAHPAIYPTGEVPRPGDLTKDEEKLYDMIVRRFLALFMEPAVRESVKVTIRAGP
HNFILSGGRTVKEGWLAVYGKYVKFEEVTLPTFLVGEKVRVLQIKREKKKTKPPARYSPA
AVIKKMEDLGLGTKATRAQILETLYQRGYIEGKKSIKVTPLGMKVIETLEKYVPEIISVE
LTREFEKKMELIMQGKLTKEEVIEEAKQKLIKILEEFKKKELEIGLELAKIVIGEDKVEK
PLVVGKCPKCGGDLIVKYNKKTGKRFIGCSNWPKCDVTYPILQRGEIIPTGRTCCNGAPV
VIVKDGKEKRVICLDMNCKEW
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgatactaatcattgccgaaaagcctaacgtcgcgaggaaaatagccggagctctagcc
gaaggaaggcccgtaaagaagagcctctttggagtcccatattatgagttcttcagggac
ggtaaaaagctaatcgttgcccctgccgtggggcacctctacggtctagctcccaagcag
gacttctttggctaccctatatttgacatagagtgggttccagtatacatagccgagaag
ggaaaagaatacgctaaggactacattaagcttctttccgttcttgccaagagggtcaag
ggattcgtggttgcatgtgactacgacacagagggtgaggtcataggatatactgcatta
aagtacgcctgcggtgtagatcctgggatagccaagagaatgaagttctcggcattaact
aagagagacttagtgaaggcatggcataatcttgagccaactataaactttggaatggca
aatgcgggaatcgcgaggcacgttcttgactggtactggggggtgaacctctctagggca
ctaacccatgccataaagagggctagtggaaaatggatagtcttgagcactggcagggtt
cagggccccaccctgaagttcctcgttgaaagggaaagagaaattcagaactttgttcca
aagccctactgggttataaagcttattttcgaaaagaacggacagaaatttatcgccaat
tatgaaaaggataaagtctgggatgaaaacgaggctaggaggatagtacttgaggcgaag
aagggaccagtgagggtagcagggatagatgtaaaaaggcagaagagaaatccaccagtc
ccctttgaccttggaaccctgcagagagaagcttattcggcctttggcttcagcccaaag
aaaaccttagatctggcccaaaacctatacgagaaaggattctcttcttaccccaggact
gaaagtcaaaagttgccaaagaacctaaactttaggtacataattcaaagcttggcaaag
atgccccagtacaggccctacgctcacatcctcctaggcatgcccgaacttaagccagtg
gagggcaaaaaggaagatccagcacatccagcaatatacccaactggagaagttcccaga
cccggcgacctaacaaaggatgaagaaaagctttacgacatgatagttaggaggttcctc
gcattattcatggagccggccgtgagggagagcgtaaaagttactattagagctggccct
cacaacttcatactttctggtggcaggactgtcaaagaaggatggcttgccgtttatgga
aagtacgttaagttcgaggaggtaaccctcccaacgttcctagttggagagaaggtcaga
gttctacagataaagagggagaaaaagaagactaagcccccagcaaggtattcacctgcg
gcggtaataaagaagatggaggacttaggtttaggaacaaaggcaacgagagctcaaata
cttgaaaccctgtatcagaggggctacatagaggggaagaagagcataaaggtaactccc
ctggggatgaaagtaattgaaaccctagagaagtacgttcccgagataatcagcgtcgag
ctaacgagggagttcgagaagaagatggaacttataatgcaaggaaagcttacaaaagag
gaagttattgaagaggcaaaacagaaactgattaagatactcgaggagttcaaaaagaag
gaacttgaaatcggccttgagttagctaagatagtcattggagaggataaggtagaaaag
cccctcgtcgttgggaagtgcccaaagtgcgggggagatctaatcgtcaagtacaacaag
aagactgggaagaggttcattggctgctcaaactggcctaagtgtgatgttacctatcca
atccttcaaagaggtgagataatccctacgggaaggacgtgctgcaacggtgcgcctgtc
gtcatagttaaggatgggaaggaaaagagggttatctgcctcgatatgaactgtaaggag
tggtaa
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