Pseudomonas yamanorum: AK972_2431
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Entry
AK972_2431 CDS
T05821
Name
(GenBank) Leucine-rich repeat domain protein
Organism
pym
Pseudomonas yamanorum
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Gene cluster
GFIT
Motif
Pfam:
NEL
LRR_8
LRR_4
LRR_1
Motif
Other DBs
NCBI-ProteinID:
AMW83231
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All DBs
Position
2716182..2720018
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AA seq
1278 aa
AA seq
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MDASLTARVQALYPNLNGGQASQFVLSRLQAGESAQQVFTLLGNRQREFDLLQEELDQWT
AAAAGQAGGASQQQRAAADIIGCWRQGIYRELPPLSTLSLGSVTDLPRLSADFSHVHSLS
VRAEVLSGEQGARLAEQFSRVQRLDVLLEATPGIELVGGLNRFTGLTQLTLSGRDMAYPA
AFMQRLGGMERLQNLTVEGVSQSLDVSALTHLRVLRMEGSVQEWPQGVTSLEHLERLDLW
RTNIRSVPTSMLAGHDRLWRGLNLRWAAFERREFMAVYEHVRGNPAHLLNEQTLAEGYCE
GVMDRLKNVRWGFGVDVVLQLRQQGMSVEQMLARTHQLLDEQLSLSQDLEAWAARELRVD
RRQVDAFYRQRAAERLLDCWREGLGPRFALSGRSARSNLSNTTLNLSGGVLGDLPRLPAP
AFAHVKQVNLSGTQVSIETLNDFLGAFRAIEELNLSSGNLVQLPSALDDFTALRQLDLSH
NQLNVTPAIQQRLSRLTTLETLDLQYNRVMSLDVRGLNALRRLNLSHTGITDWPLGVLDL
PVLESLDLSYSAITRVPPQALTGHDALMLKSNLRGCRLTPRTCADIQVFAQRTFRENPLG
VDVELLPLVGPNIYLHKPLGIPQTQLSIGRTGGDPEYFPVRVTDDPGQLLLPLQVENVGA
QARLTPAARLQQLDPSLGSAEAVECIVEWQAAGLGATAIDTRLVQLHSEHQRLSRALNSW
IDIEGYRESGGWVSAINRRRAADRILQSWRHNLRARPELPPVDGREVLDLSGLYVGDLPA
LPASMSHVSVLDLTEVKLTEQGSNGFLGSFPHLRWLMLNKNGLAHLPEVINRYTALTHLE
ATYNDLRDAVELQTLLGPLTALEWLDLGENTLANLDVSGLHGLTNLDLHNNVLEEWPTGV
LELPRLRTLDLSNNQIETIPDDALLPRHNLLMSNTNLTDNGLEERAFERLSEFLDETGFG
LGYTREQINDQLDVFLRNASREEAELSGELHPELLTPEAQKAQWFAGVAADSSKHAVWES
LKSADDSEDFFYIISQLKNAQDFITDRPELTRRVWEVLEAAEQRPALREQLFGKARGMRI
NATCGDGWILLFSDLEVSAYEFKALETVEPGKEGAALFKLARSMIRLEQTEATASRVISL
KPSVDPAEIRLAYRIGLAQRLELPRQPSGMLYRNLSQVKQADIDQAYASIIAREVTEAFT
DDLIARQYWVDYLQKQYATDFTTLAQAQALKAEALEDRYPEFGAQYEAEAVVLARQRTEQ
RQALLIRLSVQERATLGL
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
gtggatgcatcgctgacggcgagggtgcaggcgctctatcccaacctcaacggcggacag
gccagccagttcgtcctgagccgattgcaggccggtgaaagcgcccagcaggtcttcacc
ctgttgggaaaccgccaacgtgagtttgacctgttgcaggaagaacttgatcagtggacc
gccgctgctgccgggcaggcgggcggggccagccagcaacaacgggcagcggccgacatc
atcggttgctggcgccagggcatttaccgcgagctgcctcccctgagcaccctgtcgctg
ggcagcgtgacggaccttccgcggctgagcgcagacttttcccatgtgcactcgctgagt
gtgcgagccgaggtgttatcgggtgagcagggtgcaaggctggctgagcagttttcccgc
gtgcaacgccttgatgtgctccttgaggcaacgccaggcattgagttggtcggcggactg
aaccgctttaccgggcttacccagttgacattaagcggccgggatatggcctatcccgcg
gcgttcatgcagcgcctggggggaatggagcgtttgcagaacctgacagtcgagggcgtt
tcgcaaagcctggacgtcagcgccctcacgcacttgcgcgtgctgcgcatggagggctcg
gtgcaggagtggccacagggggtgacgtcacttgagcaccttgagaggctcgacctgtgg
cgaacaaacattcgctcggtgcccacctcgatgctcgccgggcatgaccgcctgtggcgc
ggtttgaacctcaggtgggccgcgtttgagcgccgggaatttatggcggtgtacgaacat
gtgcggggtaatccggcgcacctgctcaatgaacaaaccctggcggaggggtactgtgag
ggtgtgatggaccggctgaaaaatgtgcgctggggatttggcgtagacgtcgtgttgcag
ttacggcagcagggcatgagcgttgagcagatgctggcccgcacccatcagttgctggat
gaacagctttccttgagccaggacctggaggcttgggcagcccgggaactgcgggttgac
cggcgacaggtggacgctttttaccgccagcgcgccgccgagcggctcctggattgttgg
cgcgaaggcctggggccgcgttttgcgctgtcgggccgatcggcccgttccaatctttcg
aataccacgctgaacctgtcaggtggcgtgctcggcgacttgccgagattaccggcgccg
gcgttcgcccatgtgaagcaggtaaacctgagtggcacccaggtttccattgagacgctg
aacgactttctcggtgcattccgcgccattgaagagttgaacctcagtagcggcaacctg
gtgcagttgccttcggcgctggatgacttcaccgccctgcgtcagttggatctttcccac
aaccaactgaacgtcaccccggccatccagcaacgcttgagccgcctgaccacccttgaa
acgctggacttgcaatacaatcgcgtgatgagcctggatgtgcgtggcctcaacgccttg
cgccgcttgaacctcagccacaccggtatcacggactggcccctgggcgtgctggacttg
cccgtgctggaaagccttgacctgagctacagcgcaatcacccgcgtgccgccccaggca
ctcaccggccacgacgcactgatgctcaagagcaacctgcggggttgccgacttacccca
agaacttgcgccgacatccaggtctttgcgcaacgcacgttccgtgaaaacccattgggc
gttgacgttgagttactgccgctggtggggccgaatatctacctgcacaagccattgggc
attcctcaaacgcagttgagcatcggcaggaccggcggcgatccggaatatttcccggtc
cgggtgacggacgaccccggccagttgctgttgccgctgcaagtcgagaacgtcggcgcg
caagcgcgcctcaccccggcagcacgcctgcaacagttggacccttcacttggcagtgcc
gaggcggtggagtgcatcgtggaatggcaagccgccgggctcggcgccaccgccatcgac
acacgcttggtgcagctacacagcgaacatcagcgcctgagcagggcgttgaacagttgg
atcgacatcgagggttatcgcgaaagtggtggctgggtcagtgccatcaaccgtcggcgc
gcggccgacaggattcttcagagctggcgccacaacttgcgtgcccggcccgagttgccg
ccggtggacgggcgcgaggtactggacctgtccgggctgtatgtgggcgacctgccggcg
ttgcctgcttcaatgagccacgtcagcgtgctcgacctcactgaggtgaagctgacggag
cagggttccaatgggttcctgggcagttttcctcacctgcgttggcttatgctcaataaa
aacggcctggcgcacctgccggaggtgatcaaccgatacacggcgctgactcacctcgaa
gccacctacaatgatttgcgcgacgccgtggagctacagacactgcttggtccgttaact
gcactggaatggctcgaccttggcgagaacaccctggccaacctggacgtcagcggcctg
cacgggctgacaaacctggacctgcacaataacgtcctggaggagtggccgacgggggta
ttggaactgccccgcctgcgcacactcgacctcagcaataaccagatcgagaccatcccg
gacgatgccctgttgcctcggcacaacctcctgatgagcaacaccaacctgacggacaac
gggctggaagagcgcgcgttcgagcggttgagcgagttcctggatgaaacgggttttggc
ctgggttatacccgggagcaaattaatgaccaactcgatgtcttcctgcgcaatgccagt
cgcgaggaagcggagctgagcggtgagctgcatccggagctgctgacgcccgaggcacag
aaagcccaatggtttgctggcgtggcggccgattccagcaagcacgcggtctgggagtcg
ctcaagagcgctgacgacagtgaggatttcttctacatcatttcccagctgaaaaacgcc
caggacttcatcaccgaccgccctgagttgacgcgccgggtatgggaggtgctggaggcc
gccgagcaacgtccggcgttgcgcgagcaactgttcggcaaggctcgcggcatgcggatt
aacgcgacctgcggtgacggctggatcctgctgttcagcgaccttgaagtcagtgcctat
gagttcaaggccctggaaaccgtggagcccgggaaagaaggcgcggcgctgttcaagctg
gccagaagcatgatccgcctggaacagactgaagccaccgccagccgcgtgatcagcctc
aagcccagtgttgacccggcggaaattcgcctggcctatcgcatcggcctggcccaacgc
ctggagttgccgcgccagccgtccggcatgctgtaccgcaacctttcccaagtgaaacag
gccgatatcgaccaggcctacgccagcatcatcgcgagggaggtgaccgaggcgttcacc
gacgatctgatcgcgcgccagtactgggtcgattacttgcagaagcaatacgcgaccgac
tttacgacgctggcacaagcccaggccctcaaggctgaagcccttgaggatcgttatccg
gagtttggtgcgcagtacgaggcagaagccgtggtattggccaggcaaaggactgagcaa
cgccaggccctgctgattcgcctgtccgtacaggagagagcgacgctggggctataa
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