KEGG   Pseudomonas yamanorum: AK972_3308
Entry
AK972_3308        CDS       T05821                                 
Name
(GenBank) hypothetical protein
  KO
K21470  L,D-transpeptidase YcbB
Organism
pym  Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:pym00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pym01002]
    AK972_3308
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pym01011]
    AK972_3308
Peptidases and inhibitors [BR:pym01002]
 Cysteine peptidases
  Family C82
   AK972_3308
Peptidoglycan biosynthesis and degradation proteins [BR:pym01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   AK972_3308
SSDB
Motif
Pfam: YkuD Scaffold PG_binding_1
Other DBs
NCBI-ProteinID: AMW84108
LinkDB
Position
complement(3684752..3686290)
AA seq 512 aa
MSICLLVAPLVATAEDLLVVSPAPVQLALSQLSTVCPGLAGQVDAPSQARLQAFYQQQGD
VVLWSEGDRRAALQAQLQLLADDGLDPAHYRLPPTDATGNVLCIDIGTSQQYLQALQDLH
FGRLQQSRFEPVWHSQPAPDSDTQVLAMAEAGMQNVAQAFDQARPSAPLYLGLRSAYAAL
RQQPLQHWEAVASGPLLRPGMDDSRVPQLARRMVNGGYLSGTSAGTQYRGELVNAVKTFQ
QSHSLQADGVIGPGTVTELNISPAIRREQLRINLERFRWLSRDLEPDGVLVNVAAAQLSF
YQGGVPVWQTRLQVGRADRQTPLLKSRITRLTLNPTWTIPPTIMREDKLPAIRLNPEYLR
QQNLQVLDSQGNPLVPEQVDWSHPGNILLRQGAGPRNPLGRIVLRFPNPYSVYLHDTPSQ
PLFSKGPRAFSSGCVRVEQPLQLRDLLVSPAEKIRTEELLATETTHEFRLATPVPVLLGY
WTVQVDGKGALLYAPDIYGRDPVLMKAMESAL
NT seq 1539 nt   +upstreamnt  +downstreamnt
ttgagcatttgcctgctcgttgcaccgctggtcgcgacagccgaagacctgttggtggtg
tcaccggccccggtgcaactggcgctctcgcaattgtcgacggtttgcccaggcctggcc
gggcaggtcgatgcgccttcccaggcgcgtttgcaggcgttttatcagcagcagggcgac
gtggtgctgtggtccgaaggggatcgccgcgccgcattgcaagcccaactgcagttgctg
gccgacgatggcctggacccggctcactatagactgcctccgacggatgccacgggaaac
gtgctgtgcatcgacatcggcaccagccagcagtacctgcaagccctgcaggatctgcat
ttcggccgcttgcagcaatcgcgcttcgagcccgtctggcattcgcaaccggccccggac
tccgacacccaagtgctggccatggccgaggccggtatgcagaacgtcgcccaagctttc
gaccaggcccgtccgagcgcgccgctataccttggcctgcgcagcgcctatgccgccctg
cgccagcaaccgttgcagcattgggaggcggtggccagcggcccgctgttgcgccccggc
atggacgattcgcgagtgccgcaactggcgcggcgcatggtcaatggcggctacctgagc
ggcacctccgccggcacgcagtaccgtggcgagctggtcaacgcggtcaagaccttccag
caaagccattccctgcaagccgacggcgtgatcggcccgggcacggtcaccgagctgaac
atcagcccggccattcgccgcgaacaactgcgcatcaacctggagcggtttcgctggttg
tcccgggacctggagcccgacggcgtgttggtgaacgttgcggcggcgcaactgagtttc
taccaaggcggtgtgcccgtgtggcaaacccgcctgcaagtcggccgcgccgaccgccag
acaccgctgctgaaatcgcgcatcacccggctgaccctgaaccccacctggaccatcccg
cccaccatcatgcgcgaggacaagctgccggcgatccgactgaaccccgaatacctgcgc
cagcagaacctgcaagtgctcgacagtcagggcaacccgctggtgccggaacaggtcgac
tggtcgcaccccggcaacattttgctgcgccagggcgccggcccgcgcaacccgctgggc
cgaatcgtgctgcgctttcccaacccgtattcggtgtacttgcacgacacgccgagccag
ccgctgttttccaagggaccgcgggccttcagttcggggtgtgtgagggttgagcagccg
ttgcaattgcgggacttgctggtaagcccggcggagaagatccgcaccgaagagctgctg
gcgacggaaaccacccacgagttccggctcgccacgccggtacccgtgttgttggggtac
tggacggtgcaggtcgatggcaagggcgctttgctctacgcgccggacatttacgggcgc
gacccggtgttgatgaaagcgatggagagtgcgctctag

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