Pseudomonas yamanorum: AK972_5146
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Entry
AK972_5146 CDS
T05821
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pym
Pseudomonas yamanorum
Brite
KEGG Orthology (KO) [BR:
pym00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pym03016
]
AK972_5146
Enzymes [BR:
pym01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AK972_5146
Transfer RNA biogenesis [BR:
pym03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AK972_5146
Prokaryotic type
AK972_5146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
BAT
Motif
Other DBs
NCBI-ProteinID:
AMW85946
LinkDB
All DBs
Position
complement(5671465..5672382)
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AA seq
305 aa
AA seq
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MAQVKRIRRNVSGIILLDKPIGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLMQLGKTTTTADAEGDVLQVREVTVGRADIEAALPAFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAAEGDTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLHFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcattctgctcgacaagccc
attggctttacctccaatgcggcgttgcagaaggttcgctggctgctcaatgccgagaag
gcagggcacaccggcagcctcgaccccttggccaccggcgtgttgccgttgtgcttcggc
gaggccaccaagttttcgcaatacctgctcgattccgacaagggttacgaaaccctgatg
caactgggcaagaccaccaccacggcagacgccgaaggtgatgttctgcaggttcgcgaa
gtgaccgttggtcgtgctgatatcgaagcggccttgcctgcttttcgtgggcaaatcagt
cagataccgccgatgtactcggctctcaagcgtgatggccagccgctttacaagctggca
cgtgcaggtgaagtggtggagcgcgaaccgcgttctgttactattgcgcgcttggaattg
ctcgccgctgaaggcgacactgcccggttggcggtggactgcagcaaaggcacctatatc
cgtaccctcgtggaagatatcggtgagcaattaggctgtggcgcatacgttgcagaactg
cgacgcacccaggcaggccctttcaccctggcccagacggtcacgctggaagagctggaa
gccgtacatgccgaaggcggcaacgaagcggttgatcgcttcctgatgccatcggacagc
ggtttgctggattggccattgctgcacttttcggagcacagcgcgttctactggcttaac
ggccagccagtacgtgcaccggatgccccgaagttcggtatggtgcgggtacaagatcac
aacggtcgctttatcggtatcggtgaagtgagcgaagacgggcgcatcgcgccgcgtcga
ctgattcggtcagaatga
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