Candidatus Phytoplasma ziziphi: CWO85_00195
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Entry
CWO85_00195 CDS
T05675
Name
(GenBank) RluA family pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
pzi
Candidatus Phytoplasma ziziphi
Brite
KEGG Orthology (KO) [BR:
pzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pzi03009
]
CWO85_00195
Enzymes [BR:
pzi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
CWO85_00195
Ribosome biogenesis [BR:
pzi03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CWO85_00195
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF1062
Motif
Other DBs
NCBI-ProteinID:
AYJ00968
UniProt:
A0A660HLN8
LinkDB
All DBs
Position
complement(23504..24403)
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AA seq
299 aa
AA seq
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MRLLIVQDKEKNIRLDLFLTQKLNISRKYCGSLIDSGQIIVNDKISKKSYLLKTNDTIKV
PNIEKNFSSNIFEPINLKLKIIYEDQYLVVIDKPQNLIVHPSLSYSGVTLINGLYYQIKD
FQFSEGNRPGIIHRLDKDTTGLIVVGKTEEAVIRMQKLIKKREIKRIYWALIYGFLGYDC
GTCDIPIRRSIHNRLKMEVSLQGKPSITHFRILKKFEKFSLLELKLETGRMHQIRVHLSY
LKHPIVGDCLYGPKKQTLQQQLLHAKKLEFTHPFTGEKLKFETSLPLQFQEFLNKIESN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagattattaatcgttcaagataaagaaaaaaatatacgtttagatctttttttgaca
caaaaattaaatattagcagaaaatattgtggttctttaattgattctggtcagattatt
gttaatgataaaatatctaaaaaaagttatttattaaaaacaaatgatacaataaaagtt
cctaatattgaaaaaaatttttcttctaatatttttgaacctattaatttaaaattaaaa
ataatctatgaggatcagtatttagttgttattgataaacctcaaaatttaatagtccac
ccttctcttagttattctggagttactttaattaatggattatattatcaaattaaagat
tttcaattttcagaaggaaacagacctggaattattcatcgtcttgataaagatactaca
ggtttaatagttgtaggaaaaacagaagaagctgtgattagaatgcaaaaattaattaaa
aagagagaaataaaaagaatttattgggctttgatttatggttttttaggttatgattgt
ggtacctgtgatattcctataagaagaagtattcataatcgtttaaaaatggaagtttct
ttacaaggaaaaccttctattactcattttcgaattttaaagaagtttgaaaaattttct
ttattagaattaaaattagaaacaggtaggatgcatcaaattagagttcatttatcttat
ctaaaacatcctattgtcggtgattgtttatatggtccaaaaaaacaaacgttacaacaa
cagttattacatgccaaaaaattagaatttactcatcctttcactggtgaaaaattaaaa
ttcgaaacctctttacctttacagtttcaagaatttttgaataaaatagaatcaaattaa
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