Quercus lobata (valley oak): 115953159
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Entry
115953159 CDS
T07350
Name
(RefSeq) rhomboid-like protein 20
KO
K25216
ubiquitin-associated domain-containing protein 2
Organism
qlo
Quercus lobata (valley oak)
Brite
KEGG Orthology (KO) [BR:
qlo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qlo04121
]
115953159
Ubiquitin system [BR:
qlo04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
LMBR1L-GP78-UBAC2 complex
115953159
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GFIT
Motif
Pfam:
UBA
Rhomboid
DER1
CUE
Motif
Other DBs
NCBI-GeneID:
115953159
NCBI-ProteinID:
XP_030926546
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All DBs
Position
7:11283692..11297289
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AA seq
292 aa
AA seq
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MNGGPSGFNNAPVTRAFIIASALFTVFFGIQGRSAKLGLSYLDIFGKLRIWKLIASVFAF
SSTPELLFGLYLLYYFRVFERQIGSNKYSVFILFSIIASLLFEVLALALLKDPAVNLVTS
GPYGLIFASFVPFFLDIPVSTWFRVFGVRFSDKSFIYLAGLQLLLSSWKRSILPGICGIL
AGSLYRLNVFRIRKAKFPEFVTSFFSRLSWPTTGSPPSAPTRNIVGNVPSYAGRQVERNY
PSSMPSAIEPPEDSIATLVSMGFDRNSARQALVHARNDINVATNILLEAQSH
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtggtccatctggtttcaacaatgctcctgttacaagagccttcattattgcc
tctgccctcttcaccgtcttctttgggatccaaggccgttctgctaaactcggtttatca
tatttggatatttttgggaagcttcgcatttggaagttaattgcatcagtttttgccttt
tcatctacaccagaattgttgtttggactctacttgctatactatttcagggtctttgag
aggcagataggttccaataagtactcagtctttatcttgttctctataatagcttcatta
ctctttgaggtccttgctctagcacttcttaaagatcctgctgtgaacctggtcacttct
ggaccttatggtcttatatttgcgtcatttgtaccatttttccttgatattccagtttcg
acatggtttcgtgtatttggtgttcgcttctctgacaagtctttcatctatctggctggt
cttcagcttcttttatcgtcgtggaaaagatctatcttgccagggatatgtgggatccta
gctggttccttgtatcgtttgaatgtctttcgtattcgcaaggcaaagttcccagagttt
gttacttcatttttttcgcggctatcttggccaaccacagggagtccaccttcagcacca
actaggaatattgtaggaaatgtaccatcctatgcaggtcgccaagtggagagaaactat
ccttcttccatgccatctgcaatagagccacccgaggactccattgctacacttgtttcc
atgggctttgataggaactcagcccgacaggctcttgtgcatgctagaaatgacatcaat
gtggcaacaaacattcttcttgaagcgcagtcacactaa
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