Quercus suber (cork oak): 111993789
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Entry
111993789 CDS
T05868
Name
(RefSeq) cullin-4
KO
K10609
cullin 4
Organism
qsu
Quercus suber (cork oak)
Pathway
qsu03420
Nucleotide excision repair
qsu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
qsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
111993789
09124 Replication and repair
03420 Nucleotide excision repair
111993789
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
qsu04121
]
111993789
03400 DNA repair and recombination proteins [BR:
qsu03400
]
111993789
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
qsu04147
]
111993789
Ubiquitin system [BR:
qsu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Cullin
111993789
DNA repair and recombination proteins [BR:
qsu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
111993789
TCR (transcription coupled repair) factors
Cul4-CSA complex
111993789
Exosome [BR:
qsu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
111993789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Motif
Other DBs
NCBI-GeneID:
111993789
NCBI-ProteinID:
XP_023881386
LinkDB
All DBs
Position
Unknown
AA seq
840 aa
AA seq
DB search
MSLPTKRSATSTTSNNNNNNNNNSSSSSSNPNPNPTSPPPFSAMKKAKSQAAALDPKNGL
HHQDFNSSNNNSNDVVFDPSSMSVDDDFKSHDSSAPSPSPAPPRSVAANLSRKKAQPPQP
TKKLVIKLLKAKPTLPANFEEDTWAKLKSAISAIFLKQPDPIDSEILYQAVNDLCLHKLG
GNLYQRIEKECEAHVSEALQSLFGQSPDLVVFLSLVERCWQDLCDQMLLIRGIALYLDRT
YVKQTPNVRSLWDMGLQLFRKHLSLSPEVEHKTVTGLLRMIQSERLGEAVDRTLLNHLLK
MFTALGIYAESFEKPFLECTSEFYAAEGMKFMQQSDVPDYLKHVETRLHEEHERCVLYLD
ACTRKPLIATAEKQLLERHISAILDKGFMMLMDGHRIEDLQRMYSLFSRVNALESLKQAL
SSYIRRTGQGIVMDEEKDKDMVSSLLEFKVSLDTIWEESYSKNDAFCNTIKDAFEHLINL
RQNRPAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKR
LLLGKSASIDAEKSMISKLKTECGSQFTNKLEGMFKDIELSKEINESFKQSSQARTKLPS
GIELSVHVLTTGYWPTYPPMDVRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVLK
AEFPKGKKELAVSLFQTVVLMLFNDAERLSFQDIKDSTGIEDKELRRTLQSLACGKVRVL
QKMPKGRDVEDDDSFVFNDLFTAPLYRIKVNAIQMKETVEENTSTTERVFQDRQYQVDAA
IVRIMKTRKLLSHTLLITELFQQLKFPIKPADLKKRIESLIDREYLERDKNNPQIYNYLA
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccccaccaaacgctcagccacatccaccacctccaacaacaacaacaacaac
aacaacaactcttcttcttcttcttccaatcccaaccccaaccccacatctcctcctccc
ttctccgccatgaaaaaggccaaatcccaagccgcagctctcgaccccaaaaacggtctc
caccaccaggacttcaacagcagcaacaacaacagcaacgatgtcgttttcgacccctct
tccatgtccgtcgatgacgatttcaagtcccacgactcctccgccccttccccttcgcca
gctccgcctcgctccgtcgccgccaatttgtccagaaagaaagcccagccgcctcagccc
actaagaagcttgtcatcaagctcctcaaagccaaaccaacactgcctgcaaattttgaa
gaggatacgtgggcaaagctgaaatctgctatatctgctatatttttaaagcaacccgat
cctattgactcagagatactttatcaggctgttaatgacctttgtctacacaaattgggg
ggaaatctttatcaacggattgagaaggagtgtgaagcgcacgtatctgaagcattgcaa
tccttgtttggccaaagcccagatttggtggtttttctgtcacttgtcgagagatgctgg
caggatctttgtgaccaaatgttgttgattcgtggtatagccttgtatctagatagaaca
tatgtaaagcaaacacctaatgtgcgatcattgtgggacatgggattgcagcttttccgc
aaacatctttcattatctccagaagttgagcacaaaactgtcacaggccttttaagaatg
attcagagcgaaagattaggtgaagcagtggataggactctccttaaccatctcttgaag
atgtttactgcattaggaatttacgcagaaagctttgaaaagccatttcttgagtgcaca
tctgagttttatgctgctgaaggcatgaaattcatgcagcaatcagatgttccagattat
ctgaagcatgtagagacaaggttgcacgaggaacatgaaagatgtgtactctacctggat
gcttgtacaagaaaaccactaatagcaactgcagaaaagcaactccttgaacgccacata
tctgccattcttgataagggtttcatgatgctaatggatgggcaccgtattgaggacctt
cagaggatgtattcactgttttcaagggtcaatgcgcttgaatcgctaaagcaagccctt
agctcatatatccgcagaactgggcagggcattgtcatggatgaagagaaagacaaagat
atggtttcatcccttttagaatttaaggtttcgcttgatacaatatgggaagaaagctat
tccaagaatgatgcattttgcaacaccattaaggatgcatttgaacatctcatcaatctt
cgtcagaaccgacctgctgagctgattgcaaaatttctggatgaaaagcttcgtgctggg
aataagggtacttctgaggaagaattggagggtactcttgataaagttttggttttattc
aggtttattcagggcaaggatgtgtttgaagcattttataagaaggatcttgcaaaaagg
ctgcttttgggaaagagtgcttccattgatgctgagaaatccatgatctctaagctaaaa
acagagtgtggcagccaatttacaaacaaacttgaaggaatgttcaaagacattgaatta
tcaaaagaaataaatgaatccttcaaacaatcatcccaggccaggacaaaactcccatcc
gggattgagttgagtgtacatgttttaacaacagggtactggccaacatatccacccatg
gatgttagacttcctcatgaattgaatgtctaccaggacattttcaaggagttctacttg
agcaagtacagtgggaggcgcttaatgtggcaaaattcgttaggtcattgtgtgttaaaa
gctgaatttcctaaaggtaaaaaggagctggcagtttctctgtttcagactgttgtattg
atgctctttaatgatgctgagaggctaagctttcaagatattaaggactctactggaatt
gaggataaggaactaaggaggactttgcagtcccttgcttgtggaaaagttcgagtctta
caaaagatgcccaagggtagggacgtagaggatgatgattcatttgtgttcaatgattta
ttcactgctcctctttaccgtataaaggtaaatgcaatacagatgaaggaaacagtggag
gagaatacaagcaccaccgaacgagtttttcaggaccgtcaatatcaggttgatgctgct
attgtacgaataatgaagactagaaaactgctcagtcacacacttctgataactgaactc
ttccaacagctcaaatttccaataaagccagctgatttgaagaaacggattgaaagcctt
atcgacagggagtatctagagcgtgacaagaacaacccccagatatacaattacttggca
taa
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